Protein–RNA interactions for Protein: Q7RTS3

PTF1A, Pancreas transcription factor 1 subunit alpha, humanhuman

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTF1AQ7RTS3 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PTF1AQ7RTS3 AMT-206ENST00000458307 1860 ntTSL 2 BASIC20.6■□□□□ 0.89
PTF1AQ7RTS3 PCGF3-213ENST00000620529 1899 ntBASIC20.6■□□□□ 0.89
PTF1AQ7RTS3 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PTF1AQ7RTS3 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PTF1AQ7RTS3 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC20.6■□□□□ 0.89
PTF1AQ7RTS3 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
PTF1AQ7RTS3 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PTF1AQ7RTS3 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PTF1AQ7RTS3 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
PTF1AQ7RTS3 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PTF1AQ7RTS3 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
PTF1AQ7RTS3 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC20.59■□□□□ 0.89
PTF1AQ7RTS3 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
PTF1AQ7RTS3 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC20.59■□□□□ 0.89
PTF1AQ7RTS3 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTF1AQ7RTS3 AHCYP2-201ENST00000430630 1300 ntBASIC20.59■□□□□ 0.89
PTF1AQ7RTS3 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC20.59■□□□□ 0.89
PTF1AQ7RTS3 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
PTF1AQ7RTS3 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTF1AQ7RTS3 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
PTF1AQ7RTS3 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
PTF1AQ7RTS3 AL662890.1-201ENST00000396818 632 ntBASIC20.59■□□□□ 0.89
PTF1AQ7RTS3 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC20.59■□□□□ 0.89
PTF1AQ7RTS3 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC20.59■□□□□ 0.89
PTF1AQ7RTS3 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC20.59■□□□□ 0.89
PTF1AQ7RTS3 AC022137.2-201ENST00000503482 481 ntBASIC20.59■□□□□ 0.89
PTF1AQ7RTS3 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTF1AQ7RTS3 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC20.59■□□□□ 0.89
PTF1AQ7RTS3 AHRR-211ENST00000515206 462 ntTSL 5 BASIC20.59■□□□□ 0.89
PTF1AQ7RTS3 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC20.59■□□□□ 0.89
PTF1AQ7RTS3 AC023310.1-201ENST00000554836 735 ntBASIC20.59■□□□□ 0.89
PTF1AQ7RTS3 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC20.59■□□□□ 0.89
PTF1AQ7RTS3 AC097724.1-201ENST00000609581 426 ntBASIC20.59■□□□□ 0.89
PTF1AQ7RTS3 AL096828.3-201ENST00000615354 462 ntBASIC20.59■□□□□ 0.89
PTF1AQ7RTS3 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTF1AQ7RTS3 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTF1AQ7RTS3 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTF1AQ7RTS3 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTF1AQ7RTS3 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTF1AQ7RTS3 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
PTF1AQ7RTS3 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
PTF1AQ7RTS3 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
PTF1AQ7RTS3 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.58■□□□□ 0.89
PTF1AQ7RTS3 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PTF1AQ7RTS3 AGER-206ENST00000375070 1463 ntTSL 5 BASIC20.58■□□□□ 0.89
PTF1AQ7RTS3 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
PTF1AQ7RTS3 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PTF1AQ7RTS3 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PTF1AQ7RTS3 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PTF1AQ7RTS3 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PTF1AQ7RTS3 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
PTF1AQ7RTS3 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PTF1AQ7RTS3 AC004987.2-201ENST00000395959 1148 ntBASIC20.58■□□□□ 0.89
PTF1AQ7RTS3 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC20.58■□□□□ 0.89
PTF1AQ7RTS3 AC104457.1-201ENST00000401024 814 ntBASIC20.58■□□□□ 0.89
PTF1AQ7RTS3 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
PTF1AQ7RTS3 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.89
PTF1AQ7RTS3 RPS2P36-201ENST00000456516 831 ntBASIC20.58■□□□□ 0.89
PTF1AQ7RTS3 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PTF1AQ7RTS3 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PTF1AQ7RTS3 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC20.58■□□□□ 0.89
PTF1AQ7RTS3 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC20.58■□□□□ 0.89
PTF1AQ7RTS3 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
PTF1AQ7RTS3 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
PTF1AQ7RTS3 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC20.58■□□□□ 0.89
PTF1AQ7RTS3 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PTF1AQ7RTS3 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
PTF1AQ7RTS3 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PTF1AQ7RTS3 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
PTF1AQ7RTS3 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PTF1AQ7RTS3 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC20.58■□□□□ 0.88
PTF1AQ7RTS3 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PTF1AQ7RTS3 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PTF1AQ7RTS3 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC20.57■□□□□ 0.88
PTF1AQ7RTS3 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC20.57■□□□□ 0.88
PTF1AQ7RTS3 AC092978.1-202ENST00000637590 1327 ntBASIC20.57■□□□□ 0.88
PTF1AQ7RTS3 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PTF1AQ7RTS3 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
PTF1AQ7RTS3 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC20.57■□□□□ 0.88
PTF1AQ7RTS3 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PTF1AQ7RTS3 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PTF1AQ7RTS3 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PTF1AQ7RTS3 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PTF1AQ7RTS3 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC20.57■□□□□ 0.88
PTF1AQ7RTS3 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PTF1AQ7RTS3 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC20.57■□□□□ 0.88
PTF1AQ7RTS3 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC20.57■□□□□ 0.88
PTF1AQ7RTS3 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
PTF1AQ7RTS3 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PTF1AQ7RTS3 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC20.57■□□□□ 0.88
PTF1AQ7RTS3 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC20.57■□□□□ 0.88
PTF1AQ7RTS3 C2orf27AP3-201ENST00000434123 579 ntBASIC20.57■□□□□ 0.88
PTF1AQ7RTS3 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC20.57■□□□□ 0.88
PTF1AQ7RTS3 AC004898.1-201ENST00000451057 766 ntBASIC20.57■□□□□ 0.88
PTF1AQ7RTS3 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
PTF1AQ7RTS3 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC20.57■□□□□ 0.88
PTF1AQ7RTS3 BNIP3P1-202ENST00000550043 1585 ntBASIC20.57■□□□□ 0.88
PTF1AQ7RTS3 AL451050.2-201ENST00000606967 682 ntBASIC20.57■□□□□ 0.88
PTF1AQ7RTS3 AL354718.3-201ENST00000616414 581 ntBASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms