Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.49■□□□□ 0.23
RAPH1Q70E73 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.49■□□□□ 0.23
RAPH1Q70E73 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.49■□□□□ 0.23
RAPH1Q70E73 HCG4-201ENST00000418983 998 ntBASIC16.49■□□□□ 0.23
RAPH1Q70E73 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.49■□□□□ 0.23
RAPH1Q70E73 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.49■□□□□ 0.23
RAPH1Q70E73 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.49■□□□□ 0.23
RAPH1Q70E73 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.49■□□□□ 0.23
RAPH1Q70E73 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.49■□□□□ 0.23
RAPH1Q70E73 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAPH1Q70E73 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAPH1Q70E73 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAPH1Q70E73 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.49■□□□□ 0.23
RAPH1Q70E73 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAPH1Q70E73 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RAPH1Q70E73 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAPH1Q70E73 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAPH1Q70E73 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.49■□□□□ 0.23
RAPH1Q70E73 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
RAPH1Q70E73 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.49■□□□□ 0.23
RAPH1Q70E73 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
RAPH1Q70E73 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAPH1Q70E73 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAPH1Q70E73 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAPH1Q70E73 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
RAPH1Q70E73 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAPH1Q70E73 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RAPH1Q70E73 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
RAPH1Q70E73 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
RAPH1Q70E73 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAPH1Q70E73 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RAPH1Q70E73 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAPH1Q70E73 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.48■□□□□ 0.23
RAPH1Q70E73 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.48■□□□□ 0.23
RAPH1Q70E73 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RAPH1Q70E73 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.48■□□□□ 0.23
RAPH1Q70E73 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
RAPH1Q70E73 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
RAPH1Q70E73 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
RAPH1Q70E73 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAPH1Q70E73 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
RAPH1Q70E73 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.48■□□□□ 0.23
RAPH1Q70E73 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
RAPH1Q70E73 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAPH1Q70E73 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.48■□□□□ 0.23
RAPH1Q70E73 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.48■□□□□ 0.23
RAPH1Q70E73 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
RAPH1Q70E73 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
RAPH1Q70E73 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.48■□□□□ 0.23
RAPH1Q70E73 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAPH1Q70E73 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RAPH1Q70E73 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.48■□□□□ 0.23
RAPH1Q70E73 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.48■□□□□ 0.23
RAPH1Q70E73 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAPH1Q70E73 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RAPH1Q70E73 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
RAPH1Q70E73 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAPH1Q70E73 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAPH1Q70E73 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RAPH1Q70E73 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAPH1Q70E73 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAPH1Q70E73 AL603832.2-201ENST00000566195 2125 ntBASIC16.48■□□□□ 0.23
RAPH1Q70E73 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
RAPH1Q70E73 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
RAPH1Q70E73 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAPH1Q70E73 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAPH1Q70E73 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC16.47■□□□□ 0.23
RAPH1Q70E73 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
RAPH1Q70E73 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAPH1Q70E73 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
RAPH1Q70E73 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
RAPH1Q70E73 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAPH1Q70E73 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAPH1Q70E73 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.47■□□□□ 0.23
RAPH1Q70E73 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.47■□□□□ 0.23
RAPH1Q70E73 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
RAPH1Q70E73 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.47■□□□□ 0.23
RAPH1Q70E73 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAPH1Q70E73 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.47■□□□□ 0.23
RAPH1Q70E73 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAPH1Q70E73 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAPH1Q70E73 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAPH1Q70E73 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.47■□□□□ 0.23
RAPH1Q70E73 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.47■□□□□ 0.23
RAPH1Q70E73 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RAPH1Q70E73 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
RAPH1Q70E73 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RAPH1Q70E73 KRT18P27-201ENST00000427733 1299 ntBASIC16.47■□□□□ 0.23
RAPH1Q70E73 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.47■□□□□ 0.23
RAPH1Q70E73 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAPH1Q70E73 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAPH1Q70E73 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.47■□□□□ 0.23
RAPH1Q70E73 IFNL4P1-201ENST00000607083 540 ntBASIC16.47■□□□□ 0.23
RAPH1Q70E73 AC012313.10-201ENST00000623509 926 ntBASIC16.47■□□□□ 0.23
RAPH1Q70E73 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.47■□□□□ 0.23
RAPH1Q70E73 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
RAPH1Q70E73 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAPH1Q70E73 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAPH1Q70E73 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAPH1Q70E73 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms