Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXR1Q6PIV2 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.11■□□□□ 0.33
FOXR1Q6PIV2 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
FOXR1Q6PIV2 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXR1Q6PIV2 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC17.11■□□□□ 0.33
FOXR1Q6PIV2 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXR1Q6PIV2 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
FOXR1Q6PIV2 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.1■□□□□ 0.33
FOXR1Q6PIV2 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
FOXR1Q6PIV2 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.1■□□□□ 0.33
FOXR1Q6PIV2 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXR1Q6PIV2 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXR1Q6PIV2 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXR1Q6PIV2 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
FOXR1Q6PIV2 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXR1Q6PIV2 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXR1Q6PIV2 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXR1Q6PIV2 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.1■□□□□ 0.33
FOXR1Q6PIV2 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.1■□□□□ 0.33
FOXR1Q6PIV2 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.1■□□□□ 0.33
FOXR1Q6PIV2 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.1■□□□□ 0.33
FOXR1Q6PIV2 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.1■□□□□ 0.33
FOXR1Q6PIV2 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.1■□□□□ 0.33
FOXR1Q6PIV2 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.1■□□□□ 0.33
FOXR1Q6PIV2 AC034105.1-201ENST00000563488 319 ntBASIC17.1■□□□□ 0.33
FOXR1Q6PIV2 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.1■□□□□ 0.33
FOXR1Q6PIV2 NKAPP1-205ENST00000585790 367 ntBASIC17.1■□□□□ 0.33
FOXR1Q6PIV2 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
FOXR1Q6PIV2 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.1■□□□□ 0.33
FOXR1Q6PIV2 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.1■□□□□ 0.33
FOXR1Q6PIV2 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.1■□□□□ 0.33
FOXR1Q6PIV2 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXR1Q6PIV2 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
FOXR1Q6PIV2 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXR1Q6PIV2 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXR1Q6PIV2 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXR1Q6PIV2 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.1■□□□□ 0.33
FOXR1Q6PIV2 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.1■□□□□ 0.33
FOXR1Q6PIV2 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXR1Q6PIV2 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
FOXR1Q6PIV2 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXR1Q6PIV2 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
FOXR1Q6PIV2 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
FOXR1Q6PIV2 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
FOXR1Q6PIV2 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXR1Q6PIV2 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.1■□□□□ 0.33
FOXR1Q6PIV2 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC17.1■□□□□ 0.33
FOXR1Q6PIV2 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
FOXR1Q6PIV2 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.09■□□□□ 0.33
FOXR1Q6PIV2 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.09■□□□□ 0.33
FOXR1Q6PIV2 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
FOXR1Q6PIV2 AC007686.3-201ENST00000619017 3487 ntBASIC17.09■□□□□ 0.33
FOXR1Q6PIV2 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
FOXR1Q6PIV2 AC015656.1-201ENST00000624209 3578 ntBASIC17.09■□□□□ 0.33
FOXR1Q6PIV2 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC17.09■□□□□ 0.33
FOXR1Q6PIV2 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
FOXR1Q6PIV2 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC17.09■□□□□ 0.33
FOXR1Q6PIV2 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
FOXR1Q6PIV2 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
FOXR1Q6PIV2 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
FOXR1Q6PIV2 UPF3AP3-201ENST00000420996 769 ntBASIC17.09■□□□□ 0.33
FOXR1Q6PIV2 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.09■□□□□ 0.33
FOXR1Q6PIV2 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.09■□□□□ 0.33
FOXR1Q6PIV2 AL591424.1-201ENST00000442569 1213 ntBASIC17.09■□□□□ 0.33
FOXR1Q6PIV2 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
FOXR1Q6PIV2 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.09■□□□□ 0.33
FOXR1Q6PIV2 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.09■□□□□ 0.33
FOXR1Q6PIV2 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.09■□□□□ 0.33
FOXR1Q6PIV2 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.09■□□□□ 0.33
FOXR1Q6PIV2 AC025062.2-201ENST00000605477 670 ntBASIC17.09■□□□□ 0.33
FOXR1Q6PIV2 AP002414.3-201ENST00000589352 1468 ntBASIC17.09■□□□□ 0.33
FOXR1Q6PIV2 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FOXR1Q6PIV2 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FOXR1Q6PIV2 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC17.09■□□□□ 0.33
FOXR1Q6PIV2 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.09■□□□□ 0.33
FOXR1Q6PIV2 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.09■□□□□ 0.33
FOXR1Q6PIV2 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FOXR1Q6PIV2 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
FOXR1Q6PIV2 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC17.09■□□□□ 0.33
FOXR1Q6PIV2 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC17.09■□□□□ 0.33
FOXR1Q6PIV2 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FOXR1Q6PIV2 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
FOXR1Q6PIV2 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC17.09■□□□□ 0.33
FOXR1Q6PIV2 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
FOXR1Q6PIV2 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
FOXR1Q6PIV2 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
FOXR1Q6PIV2 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
FOXR1Q6PIV2 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC17.08■□□□□ 0.33
FOXR1Q6PIV2 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
FOXR1Q6PIV2 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
FOXR1Q6PIV2 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC17.08■□□□□ 0.33
FOXR1Q6PIV2 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
FOXR1Q6PIV2 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
FOXR1Q6PIV2 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
FOXR1Q6PIV2 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
FOXR1Q6PIV2 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
FOXR1Q6PIV2 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
FOXR1Q6PIV2 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
FOXR1Q6PIV2 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
FOXR1Q6PIV2 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms