Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
C11orf88Q6PI97 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.34□□□□□ -0.11
C11orf88Q6PI97 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
C11orf88Q6PI97 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
C11orf88Q6PI97 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
C11orf88Q6PI97 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC14.33□□□□□ -0.11
C11orf88Q6PI97 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
C11orf88Q6PI97 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
C11orf88Q6PI97 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
C11orf88Q6PI97 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
C11orf88Q6PI97 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC14.33□□□□□ -0.11
C11orf88Q6PI97 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
C11orf88Q6PI97 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
C11orf88Q6PI97 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
C11orf88Q6PI97 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
C11orf88Q6PI97 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
C11orf88Q6PI97 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
C11orf88Q6PI97 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.33□□□□□ -0.12
C11orf88Q6PI97 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
C11orf88Q6PI97 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
C11orf88Q6PI97 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
C11orf88Q6PI97 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
C11orf88Q6PI97 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.33□□□□□ -0.12
C11orf88Q6PI97 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
C11orf88Q6PI97 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
C11orf88Q6PI97 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
C11orf88Q6PI97 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
C11orf88Q6PI97 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
C11orf88Q6PI97 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
C11orf88Q6PI97 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC14.33□□□□□ -0.12
C11orf88Q6PI97 AC068472.1-201ENST00000474589 881 ntBASIC14.33□□□□□ -0.12
C11orf88Q6PI97 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC14.33□□□□□ -0.12
C11orf88Q6PI97 CDV3-207ENST00000508481 661 ntTSL 3 BASIC14.33□□□□□ -0.12
C11orf88Q6PI97 UNC93B7-201ENST00000509439 705 ntBASIC14.33□□□□□ -0.12
C11orf88Q6PI97 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
C11orf88Q6PI97 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC14.33□□□□□ -0.12
C11orf88Q6PI97 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
C11orf88Q6PI97 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
C11orf88Q6PI97 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
C11orf88Q6PI97 TMED1-207ENST00000591695 809 ntTSL 5 BASIC14.33□□□□□ -0.12
C11orf88Q6PI97 AC138894.3-201ENST00000603787 634 ntBASIC14.33□□□□□ -0.12
C11orf88Q6PI97 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC14.33□□□□□ -0.12
C11orf88Q6PI97 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC14.33□□□□□ -0.12
C11orf88Q6PI97 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
C11orf88Q6PI97 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
C11orf88Q6PI97 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC14.33□□□□□ -0.12
C11orf88Q6PI97 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
C11orf88Q6PI97 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
C11orf88Q6PI97 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
C11orf88Q6PI97 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
C11orf88Q6PI97 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.33□□□□□ -0.12
C11orf88Q6PI97 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
C11orf88Q6PI97 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
C11orf88Q6PI97 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
C11orf88Q6PI97 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
C11orf88Q6PI97 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
C11orf88Q6PI97 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
C11orf88Q6PI97 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
C11orf88Q6PI97 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
C11orf88Q6PI97 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC14.33□□□□□ -0.12
C11orf88Q6PI97 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
C11orf88Q6PI97 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
C11orf88Q6PI97 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
C11orf88Q6PI97 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
C11orf88Q6PI97 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
C11orf88Q6PI97 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC14.32□□□□□ -0.12
C11orf88Q6PI97 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
C11orf88Q6PI97 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
C11orf88Q6PI97 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.32□□□□□ -0.12
C11orf88Q6PI97 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.32□□□□□ -0.12
C11orf88Q6PI97 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
C11orf88Q6PI97 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
C11orf88Q6PI97 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
C11orf88Q6PI97 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
C11orf88Q6PI97 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
C11orf88Q6PI97 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC14.32□□□□□ -0.12
C11orf88Q6PI97 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
C11orf88Q6PI97 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
C11orf88Q6PI97 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
C11orf88Q6PI97 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
C11orf88Q6PI97 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
C11orf88Q6PI97 NSUN5P1-202ENST00000421140 1535 ntBASIC14.32□□□□□ -0.12
C11orf88Q6PI97 NSUN5P2-203ENST00000457352 1529 ntBASIC14.32□□□□□ -0.12
C11orf88Q6PI97 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
C11orf88Q6PI97 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
C11orf88Q6PI97 EGFEM1P-202ENST00000431685 1563 ntBASIC14.32□□□□□ -0.12
C11orf88Q6PI97 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
C11orf88Q6PI97 DFFB-203ENST00000341385 572 ntTSL 5 BASIC14.32□□□□□ -0.12
C11orf88Q6PI97 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
C11orf88Q6PI97 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
C11orf88Q6PI97 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
C11orf88Q6PI97 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
C11orf88Q6PI97 DANCR-204ENST00000444958 709 ntTSL 3 BASIC14.32□□□□□ -0.12
C11orf88Q6PI97 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC14.32□□□□□ -0.12
C11orf88Q6PI97 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC14.32□□□□□ -0.12
C11orf88Q6PI97 AL121912.1-201ENST00000603683 238 ntBASIC14.32□□□□□ -0.12
C11orf88Q6PI97 AL732292.2-201ENST00000609649 430 ntBASIC14.32□□□□□ -0.12
C11orf88Q6PI97 CCNC-219ENST00000627680 896 ntTSL 5 BASIC14.32□□□□□ -0.12
C11orf88Q6PI97 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
C11orf88Q6PI97 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms