Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 GRN-214ENST00000589265 1632 ntTSL 5 BASIC17.36■□□□□ 0.37
CNKSR3Q6P9H4 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CNKSR3Q6P9H4 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CNKSR3Q6P9H4 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.35■□□□□ 0.37
CNKSR3Q6P9H4 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.35■□□□□ 0.37
CNKSR3Q6P9H4 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CNKSR3Q6P9H4 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CNKSR3Q6P9H4 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CNKSR3Q6P9H4 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.35■□□□□ 0.37
CNKSR3Q6P9H4 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
CNKSR3Q6P9H4 AC074338.1-201ENST00000416825 156 ntBASIC17.35■□□□□ 0.37
CNKSR3Q6P9H4 SOCS2P1-201ENST00000417727 557 ntBASIC17.35■□□□□ 0.37
CNKSR3Q6P9H4 TARDBPP1-201ENST00000442013 1203 ntBASIC17.35■□□□□ 0.37
CNKSR3Q6P9H4 AL355864.2-201ENST00000447420 863 ntBASIC17.35■□□□□ 0.37
CNKSR3Q6P9H4 NME4-207ENST00000450036 985 ntTSL 3 BASIC17.35■□□□□ 0.37
CNKSR3Q6P9H4 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC17.35■□□□□ 0.37
CNKSR3Q6P9H4 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CNKSR3Q6P9H4 CD74-212ENST00000524315 584 ntTSL 5 BASIC17.35■□□□□ 0.37
CNKSR3Q6P9H4 AP001889.1-201ENST00000525414 633 ntBASIC17.35■□□□□ 0.37
CNKSR3Q6P9H4 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC17.35■□□□□ 0.37
CNKSR3Q6P9H4 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC17.35■□□□□ 0.37
CNKSR3Q6P9H4 AC124283.3-201ENST00000570869 594 ntBASIC17.35■□□□□ 0.37
CNKSR3Q6P9H4 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC17.35■□□□□ 0.37
CNKSR3Q6P9H4 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC17.35■□□□□ 0.37
CNKSR3Q6P9H4 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CNKSR3Q6P9H4 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC17.35■□□□□ 0.37
CNKSR3Q6P9H4 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CNKSR3Q6P9H4 AC020907.1-201ENST00000616460 1350 ntBASIC17.35■□□□□ 0.37
CNKSR3Q6P9H4 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CNKSR3Q6P9H4 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CNKSR3Q6P9H4 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.35■□□□□ 0.37
CNKSR3Q6P9H4 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CNKSR3Q6P9H4 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CNKSR3Q6P9H4 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CNKSR3Q6P9H4 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CNKSR3Q6P9H4 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CNKSR3Q6P9H4 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CNKSR3Q6P9H4 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CNKSR3Q6P9H4 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.35■□□□□ 0.37
CNKSR3Q6P9H4 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CNKSR3Q6P9H4 INTS4P2-202ENST00000614726 2019 ntBASIC17.35■□□□□ 0.37
CNKSR3Q6P9H4 LETM1P2-201ENST00000597330 2178 ntBASIC17.35■□□□□ 0.37
CNKSR3Q6P9H4 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
CNKSR3Q6P9H4 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CNKSR3Q6P9H4 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.34■□□□□ 0.37
CNKSR3Q6P9H4 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CNKSR3Q6P9H4 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CNKSR3Q6P9H4 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CNKSR3Q6P9H4 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CNKSR3Q6P9H4 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CNKSR3Q6P9H4 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CNKSR3Q6P9H4 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CNKSR3Q6P9H4 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CNKSR3Q6P9H4 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CNKSR3Q6P9H4 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CNKSR3Q6P9H4 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC17.34■□□□□ 0.37
CNKSR3Q6P9H4 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC17.34■□□□□ 0.37
CNKSR3Q6P9H4 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC17.34■□□□□ 0.37
CNKSR3Q6P9H4 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC17.34■□□□□ 0.37
CNKSR3Q6P9H4 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC17.34■□□□□ 0.37
CNKSR3Q6P9H4 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC17.34■□□□□ 0.37
CNKSR3Q6P9H4 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CNKSR3Q6P9H4 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.34■□□□□ 0.37
CNKSR3Q6P9H4 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CNKSR3Q6P9H4 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CNKSR3Q6P9H4 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CNKSR3Q6P9H4 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC17.34■□□□□ 0.37
CNKSR3Q6P9H4 OR6D1P-202ENST00000641007 5290 ntBASIC17.34■□□□□ 0.37
CNKSR3Q6P9H4 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.34■□□□□ 0.37
CNKSR3Q6P9H4 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CNKSR3Q6P9H4 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.33■□□□□ 0.37
CNKSR3Q6P9H4 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
CNKSR3Q6P9H4 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CNKSR3Q6P9H4 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.33■□□□□ 0.37
CNKSR3Q6P9H4 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CNKSR3Q6P9H4 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.33■□□□□ 0.37
CNKSR3Q6P9H4 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CNKSR3Q6P9H4 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.33■□□□□ 0.37
CNKSR3Q6P9H4 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CNKSR3Q6P9H4 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CNKSR3Q6P9H4 TP73-213ENST00000604479 1623 ntTSL 5 BASIC17.33■□□□□ 0.37
CNKSR3Q6P9H4 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CNKSR3Q6P9H4 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CNKSR3Q6P9H4 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.33■□□□□ 0.36
CNKSR3Q6P9H4 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.33■□□□□ 0.36
CNKSR3Q6P9H4 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CNKSR3Q6P9H4 AC092933.1-201ENST00000393644 945 ntBASIC17.33■□□□□ 0.36
CNKSR3Q6P9H4 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CNKSR3Q6P9H4 TOMM22P5-201ENST00000416399 439 ntBASIC17.33■□□□□ 0.36
CNKSR3Q6P9H4 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC17.33■□□□□ 0.36
CNKSR3Q6P9H4 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC17.33■□□□□ 0.36
CNKSR3Q6P9H4 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC17.33■□□□□ 0.36
CNKSR3Q6P9H4 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC17.33■□□□□ 0.36
CNKSR3Q6P9H4 POU5F1P6-201ENST00000466990 990 ntBASIC17.33■□□□□ 0.36
CNKSR3Q6P9H4 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CNKSR3Q6P9H4 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC17.33■□□□□ 0.36
CNKSR3Q6P9H4 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
CNKSR3Q6P9H4 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CNKSR3Q6P9H4 AP000812.2-201ENST00000538934 718 ntBASIC17.33■□□□□ 0.36
CNKSR3Q6P9H4 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms