Protein–RNA interactions for Protein: Q3KNV8

PCGF3, Polycomb group RING finger protein 3, humanhuman

Predictions only

Length 242 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3Q3KNV8 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCGF3Q3KNV8 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCGF3Q3KNV8 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCGF3Q3KNV8 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PCGF3Q3KNV8 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.54□□□□□ -0.08
PCGF3Q3KNV8 FABP5-202ENST00000396359 986 ntTSL 5 BASIC14.54□□□□□ -0.08
PCGF3Q3KNV8 HNRNPA1P28-201ENST00000424481 961 ntBASIC14.54□□□□□ -0.08
PCGF3Q3KNV8 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.54□□□□□ -0.08
PCGF3Q3KNV8 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC14.54□□□□□ -0.08
PCGF3Q3KNV8 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.54□□□□□ -0.08
PCGF3Q3KNV8 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC14.54□□□□□ -0.08
PCGF3Q3KNV8 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCGF3Q3KNV8 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PCGF3Q3KNV8 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC14.54□□□□□ -0.08
PCGF3Q3KNV8 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC14.54□□□□□ -0.08
PCGF3Q3KNV8 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC14.54□□□□□ -0.08
PCGF3Q3KNV8 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC14.54□□□□□ -0.08
PCGF3Q3KNV8 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCGF3Q3KNV8 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
PCGF3Q3KNV8 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.54□□□□□ -0.08
PCGF3Q3KNV8 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCGF3Q3KNV8 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC14.54□□□□□ -0.08
PCGF3Q3KNV8 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC14.54□□□□□ -0.08
PCGF3Q3KNV8 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.54□□□□□ -0.08
PCGF3Q3KNV8 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCGF3Q3KNV8 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.54□□□□□ -0.08
PCGF3Q3KNV8 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCGF3Q3KNV8 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
PCGF3Q3KNV8 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCGF3Q3KNV8 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCGF3Q3KNV8 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCGF3Q3KNV8 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PCGF3Q3KNV8 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.53□□□□□ -0.08
PCGF3Q3KNV8 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.53□□□□□ -0.08
PCGF3Q3KNV8 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCGF3Q3KNV8 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.53□□□□□ -0.08
PCGF3Q3KNV8 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
PCGF3Q3KNV8 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCGF3Q3KNV8 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCGF3Q3KNV8 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PCGF3Q3KNV8 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCGF3Q3KNV8 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC14.53□□□□□ -0.08
PCGF3Q3KNV8 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC14.53□□□□□ -0.08
PCGF3Q3KNV8 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCGF3Q3KNV8 TUBB8P12-201ENST00000308911 1335 ntBASIC14.53□□□□□ -0.08
PCGF3Q3KNV8 TUBB7P-202ENST00000428444 1305 ntBASIC14.53□□□□□ -0.08
PCGF3Q3KNV8 TUBB8P7-204ENST00000567960 1332 ntBASIC14.53□□□□□ -0.08
PCGF3Q3KNV8 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PCGF3Q3KNV8 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCGF3Q3KNV8 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PCGF3Q3KNV8 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
PCGF3Q3KNV8 AC007967.2-201ENST00000432613 625 ntBASIC14.53□□□□□ -0.08
PCGF3Q3KNV8 PAWRP1-201ENST00000451083 565 ntBASIC14.53□□□□□ -0.08
PCGF3Q3KNV8 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC14.53□□□□□ -0.08
PCGF3Q3KNV8 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC14.53□□□□□ -0.08
PCGF3Q3KNV8 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.53□□□□□ -0.08
PCGF3Q3KNV8 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC14.53□□□□□ -0.08
PCGF3Q3KNV8 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
PCGF3Q3KNV8 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
PCGF3Q3KNV8 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCGF3Q3KNV8 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PCGF3Q3KNV8 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
PCGF3Q3KNV8 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCGF3Q3KNV8 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCGF3Q3KNV8 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCGF3Q3KNV8 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCGF3Q3KNV8 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.53□□□□□ -0.08
PCGF3Q3KNV8 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCGF3Q3KNV8 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
PCGF3Q3KNV8 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCGF3Q3KNV8 AC126177.1-201ENST00000547829 2218 ntBASIC14.53□□□□□ -0.08
PCGF3Q3KNV8 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCGF3Q3KNV8 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.53□□□□□ -0.08
PCGF3Q3KNV8 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PCGF3Q3KNV8 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
PCGF3Q3KNV8 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PCGF3Q3KNV8 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
PCGF3Q3KNV8 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PCGF3Q3KNV8 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
PCGF3Q3KNV8 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
PCGF3Q3KNV8 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PCGF3Q3KNV8 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
PCGF3Q3KNV8 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.52□□□□□ -0.08
PCGF3Q3KNV8 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC14.52□□□□□ -0.08
PCGF3Q3KNV8 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
PCGF3Q3KNV8 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PCGF3Q3KNV8 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PCGF3Q3KNV8 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PCGF3Q3KNV8 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
PCGF3Q3KNV8 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
PCGF3Q3KNV8 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PCGF3Q3KNV8 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PCGF3Q3KNV8 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
PCGF3Q3KNV8 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
PCGF3Q3KNV8 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
PCGF3Q3KNV8 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PCGF3Q3KNV8 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
PCGF3Q3KNV8 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PCGF3Q3KNV8 AC129492.6-201ENST00000611383 1305 ntBASIC14.52□□□□□ -0.08
PCGF3Q3KNV8 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms