Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
HMGCS1Q01581 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HMGCS1Q01581 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.77■□□□□ 0.12
HMGCS1Q01581 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HMGCS1Q01581 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HMGCS1Q01581 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
HMGCS1Q01581 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.77■□□□□ 0.11
HMGCS1Q01581 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
HMGCS1Q01581 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.77■□□□□ 0.11
HMGCS1Q01581 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
HMGCS1Q01581 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
HMGCS1Q01581 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
HMGCS1Q01581 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
HMGCS1Q01581 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
HMGCS1Q01581 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
HMGCS1Q01581 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HMGCS1Q01581 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.76■□□□□ 0.11
HMGCS1Q01581 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HMGCS1Q01581 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HMGCS1Q01581 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.76■□□□□ 0.11
HMGCS1Q01581 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
HMGCS1Q01581 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.76■□□□□ 0.11
HMGCS1Q01581 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HMGCS1Q01581 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HMGCS1Q01581 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HMGCS1Q01581 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HMGCS1Q01581 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
HMGCS1Q01581 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
HMGCS1Q01581 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HMGCS1Q01581 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.76■□□□□ 0.11
HMGCS1Q01581 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
HMGCS1Q01581 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HMGCS1Q01581 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HMGCS1Q01581 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HMGCS1Q01581 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
HMGCS1Q01581 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
HMGCS1Q01581 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.76■□□□□ 0.11
HMGCS1Q01581 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.76■□□□□ 0.11
HMGCS1Q01581 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HMGCS1Q01581 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HMGCS1Q01581 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HMGCS1Q01581 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.76■□□□□ 0.11
HMGCS1Q01581 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.76■□□□□ 0.11
HMGCS1Q01581 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC15.76■□□□□ 0.11
HMGCS1Q01581 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HMGCS1Q01581 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.76■□□□□ 0.11
HMGCS1Q01581 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.76■□□□□ 0.11
HMGCS1Q01581 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.76■□□□□ 0.11
HMGCS1Q01581 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.76■□□□□ 0.11
HMGCS1Q01581 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.76■□□□□ 0.11
HMGCS1Q01581 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.76■□□□□ 0.11
HMGCS1Q01581 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.76■□□□□ 0.11
HMGCS1Q01581 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HMGCS1Q01581 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.76■□□□□ 0.11
HMGCS1Q01581 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HMGCS1Q01581 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
HMGCS1Q01581 AC069224.1-201ENST00000566372 1715 ntBASIC15.76■□□□□ 0.11
HMGCS1Q01581 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HMGCS1Q01581 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
HMGCS1Q01581 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HMGCS1Q01581 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
HMGCS1Q01581 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HMGCS1Q01581 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
HMGCS1Q01581 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HMGCS1Q01581 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
HMGCS1Q01581 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.75■□□□□ 0.11
HMGCS1Q01581 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
HMGCS1Q01581 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HMGCS1Q01581 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HMGCS1Q01581 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HMGCS1Q01581 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HMGCS1Q01581 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HMGCS1Q01581 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
HMGCS1Q01581 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
HMGCS1Q01581 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.75■□□□□ 0.11
HMGCS1Q01581 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
HMGCS1Q01581 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
HMGCS1Q01581 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HMGCS1Q01581 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HMGCS1Q01581 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HMGCS1Q01581 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HMGCS1Q01581 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
HMGCS1Q01581 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.75■□□□□ 0.11
HMGCS1Q01581 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HMGCS1Q01581 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HMGCS1Q01581 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
HMGCS1Q01581 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.75■□□□□ 0.11
HMGCS1Q01581 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.75■□□□□ 0.11
HMGCS1Q01581 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.75■□□□□ 0.11
HMGCS1Q01581 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
HMGCS1Q01581 RHOQP3-201ENST00000437982 621 ntBASIC15.75■□□□□ 0.11
HMGCS1Q01581 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HMGCS1Q01581 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC15.75■□□□□ 0.11
HMGCS1Q01581 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.75■□□□□ 0.11
HMGCS1Q01581 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.75■□□□□ 0.11
HMGCS1Q01581 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.75■□□□□ 0.11
HMGCS1Q01581 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC15.75■□□□□ 0.11
HMGCS1Q01581 Z83851.2-201ENST00000609564 659 ntBASIC15.75■□□□□ 0.11
HMGCS1Q01581 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HMGCS1Q01581 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms