Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
IRX4P78413 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.06■□□□□ 0.32
IRX4P78413 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
IRX4P78413 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
IRX4P78413 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
IRX4P78413 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
IRX4P78413 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.06■□□□□ 0.32
IRX4P78413 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
IRX4P78413 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
IRX4P78413 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.06■□□□□ 0.32
IRX4P78413 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.06■□□□□ 0.32
IRX4P78413 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
IRX4P78413 AC015922.1-201ENST00000421102 1152 ntBASIC17.06■□□□□ 0.32
IRX4P78413 AC005034.1-201ENST00000426657 489 ntBASIC17.06■□□□□ 0.32
IRX4P78413 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.06■□□□□ 0.32
IRX4P78413 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.06■□□□□ 0.32
IRX4P78413 AL513480.1-201ENST00000451731 511 ntBASIC17.06■□□□□ 0.32
IRX4P78413 TIMM8BP1-201ENST00000452384 211 ntBASIC17.06■□□□□ 0.32
IRX4P78413 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC17.06■□□□□ 0.32
IRX4P78413 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
IRX4P78413 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
IRX4P78413 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17.06■□□□□ 0.32
IRX4P78413 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.06■□□□□ 0.32
IRX4P78413 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.06■□□□□ 0.32
IRX4P78413 AL035252.4-201ENST00000624174 288 ntBASIC17.06■□□□□ 0.32
IRX4P78413 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
IRX4P78413 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
IRX4P78413 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.06■□□□□ 0.32
IRX4P78413 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
IRX4P78413 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
IRX4P78413 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
IRX4P78413 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
IRX4P78413 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
IRX4P78413 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
IRX4P78413 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
IRX4P78413 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
IRX4P78413 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
IRX4P78413 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
IRX4P78413 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
IRX4P78413 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
IRX4P78413 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
IRX4P78413 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
IRX4P78413 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
IRX4P78413 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
IRX4P78413 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
IRX4P78413 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
IRX4P78413 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
IRX4P78413 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
IRX4P78413 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
IRX4P78413 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
IRX4P78413 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.05■□□□□ 0.32
IRX4P78413 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
IRX4P78413 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
IRX4P78413 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.05■□□□□ 0.32
IRX4P78413 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
IRX4P78413 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
IRX4P78413 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.05■□□□□ 0.32
IRX4P78413 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
IRX4P78413 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
IRX4P78413 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
IRX4P78413 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
IRX4P78413 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.05■□□□□ 0.32
IRX4P78413 FAM185BP-201ENST00000443595 716 ntBASIC17.05■□□□□ 0.32
IRX4P78413 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
IRX4P78413 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
IRX4P78413 INGX-202ENST00000489074 768 ntBASIC17.05■□□□□ 0.32
IRX4P78413 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.05■□□□□ 0.32
IRX4P78413 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.05■□□□□ 0.32
IRX4P78413 AC112191.1-201ENST00000523689 701 ntBASIC17.05■□□□□ 0.32
IRX4P78413 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
IRX4P78413 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
IRX4P78413 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.05■□□□□ 0.32
IRX4P78413 RBM7-207ENST00000544582 692 ntTSL 3 BASIC17.05■□□□□ 0.32
IRX4P78413 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.05■□□□□ 0.32
IRX4P78413 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
IRX4P78413 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
IRX4P78413 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
IRX4P78413 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.05■□□□□ 0.32
IRX4P78413 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC17.05■□□□□ 0.32
IRX4P78413 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.05■□□□□ 0.32
IRX4P78413 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
IRX4P78413 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
IRX4P78413 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
IRX4P78413 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
IRX4P78413 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC17.05■□□□□ 0.32
IRX4P78413 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
IRX4P78413 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
IRX4P78413 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.05■□□□□ 0.32
IRX4P78413 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
IRX4P78413 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
IRX4P78413 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
IRX4P78413 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.05■□□□□ 0.32
IRX4P78413 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.05■□□□□ 0.32
IRX4P78413 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC17.04■□□□□ 0.32
IRX4P78413 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
IRX4P78413 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
IRX4P78413 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
IRX4P78413 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
IRX4P78413 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
IRX4P78413 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms