Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RIPPLY3P57055 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
RIPPLY3P57055 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RIPPLY3P57055 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC13.58□□□□□ -0.24
RIPPLY3P57055 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC13.58□□□□□ -0.24
RIPPLY3P57055 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RIPPLY3P57055 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RIPPLY3P57055 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
RIPPLY3P57055 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
RIPPLY3P57055 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RIPPLY3P57055 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RIPPLY3P57055 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RIPPLY3P57055 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC13.58□□□□□ -0.24
RIPPLY3P57055 RPL37AP1-201ENST00000412502 279 ntBASIC13.58□□□□□ -0.24
RIPPLY3P57055 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC13.58□□□□□ -0.24
RIPPLY3P57055 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC13.58□□□□□ -0.24
RIPPLY3P57055 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC13.58□□□□□ -0.24
RIPPLY3P57055 MTRF1LP2-201ENST00000506027 1122 ntBASIC13.58□□□□□ -0.24
RIPPLY3P57055 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC13.58□□□□□ -0.24
RIPPLY3P57055 SLC25A47P1-201ENST00000531577 414 ntBASIC13.58□□□□□ -0.24
RIPPLY3P57055 PGAM1P5-201ENST00000548011 764 ntBASIC13.58□□□□□ -0.24
RIPPLY3P57055 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC13.58□□□□□ -0.24
RIPPLY3P57055 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC13.58□□□□□ -0.24
RIPPLY3P57055 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC13.58□□□□□ -0.24
RIPPLY3P57055 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.58□□□□□ -0.24
RIPPLY3P57055 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC13.58□□□□□ -0.24
RIPPLY3P57055 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RIPPLY3P57055 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
RIPPLY3P57055 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
RIPPLY3P57055 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
RIPPLY3P57055 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RIPPLY3P57055 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
RIPPLY3P57055 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
RIPPLY3P57055 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
RIPPLY3P57055 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RIPPLY3P57055 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RIPPLY3P57055 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
RIPPLY3P57055 LINC00554-201ENST00000564841 3011 ntBASIC13.58□□□□□ -0.24
RIPPLY3P57055 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RIPPLY3P57055 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
RIPPLY3P57055 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RIPPLY3P57055 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC13.57□□□□□ -0.24
RIPPLY3P57055 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC13.57□□□□□ -0.24
RIPPLY3P57055 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
RIPPLY3P57055 AC067852.2-201ENST00000590513 2313 ntBASIC13.57□□□□□ -0.24
RIPPLY3P57055 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RIPPLY3P57055 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC13.57□□□□□ -0.24
RIPPLY3P57055 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC13.57□□□□□ -0.24
RIPPLY3P57055 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC13.57□□□□□ -0.24
RIPPLY3P57055 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC13.57□□□□□ -0.24
RIPPLY3P57055 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
RIPPLY3P57055 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
RIPPLY3P57055 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
RIPPLY3P57055 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RIPPLY3P57055 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC13.57□□□□□ -0.24
RIPPLY3P57055 SNX21-203ENST00000372541 771 ntTSL 2 BASIC13.57□□□□□ -0.24
RIPPLY3P57055 USB1-202ENST00000423271 1217 ntTSL 2 BASIC13.57□□□□□ -0.24
RIPPLY3P57055 RN7SL618P-201ENST00000477850 296 ntBASIC13.57□□□□□ -0.24
RIPPLY3P57055 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC13.57□□□□□ -0.24
RIPPLY3P57055 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC13.57□□□□□ -0.24
RIPPLY3P57055 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC13.57□□□□□ -0.24
RIPPLY3P57055 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC13.57□□□□□ -0.24
RIPPLY3P57055 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC13.57□□□□□ -0.24
RIPPLY3P57055 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
RIPPLY3P57055 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
RIPPLY3P57055 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC13.57□□□□□ -0.24
RIPPLY3P57055 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RIPPLY3P57055 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC13.57□□□□□ -0.24
RIPPLY3P57055 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
RIPPLY3P57055 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.57□□□□□ -0.24
RIPPLY3P57055 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RIPPLY3P57055 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
RIPPLY3P57055 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RIPPLY3P57055 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
RIPPLY3P57055 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RIPPLY3P57055 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
RIPPLY3P57055 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RIPPLY3P57055 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
RIPPLY3P57055 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RIPPLY3P57055 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC13.57□□□□□ -0.24
RIPPLY3P57055 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
RIPPLY3P57055 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RIPPLY3P57055 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RIPPLY3P57055 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RIPPLY3P57055 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RIPPLY3P57055 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC13.56□□□□□ -0.24
RIPPLY3P57055 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RIPPLY3P57055 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RIPPLY3P57055 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC13.56□□□□□ -0.24
RIPPLY3P57055 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
RIPPLY3P57055 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
RIPPLY3P57055 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RIPPLY3P57055 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RIPPLY3P57055 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC13.56□□□□□ -0.24
RIPPLY3P57055 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC13.56□□□□□ -0.24
RIPPLY3P57055 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
RIPPLY3P57055 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
RIPPLY3P57055 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
RIPPLY3P57055 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
RIPPLY3P57055 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms