Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.56■□□□□ 0.08
NR1H2P55055 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NR1H2P55055 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NR1H2P55055 TLE1-202ENST00000376484 666 ntTSL 3 BASIC15.56■□□□□ 0.08
NR1H2P55055 RCN1P2-201ENST00000398357 915 ntBASIC15.56■□□□□ 0.08
NR1H2P55055 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NR1H2P55055 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
NR1H2P55055 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NR1H2P55055 AC132008.2-207ENST00000454517 770 ntBASIC15.56■□□□□ 0.08
NR1H2P55055 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NR1H2P55055 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.56■□□□□ 0.08
NR1H2P55055 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.56■□□□□ 0.08
NR1H2P55055 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC15.56■□□□□ 0.08
NR1H2P55055 GZMM-202ENST00000592501 941 ntTSL 3 BASIC15.56■□□□□ 0.08
NR1H2P55055 AL138831.2-201ENST00000606564 490 ntBASIC15.56■□□□□ 0.08
NR1H2P55055 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
NR1H2P55055 HLA-A-201ENST00000376802 1334 ntBASIC15.56■□□□□ 0.08
NR1H2P55055 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NR1H2P55055 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
NR1H2P55055 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NR1H2P55055 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC15.56■□□□□ 0.08
NR1H2P55055 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC15.56■□□□□ 0.08
NR1H2P55055 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC15.56■□□□□ 0.08
NR1H2P55055 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC15.56■□□□□ 0.08
NR1H2P55055 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NR1H2P55055 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
NR1H2P55055 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NR1H2P55055 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NR1H2P55055 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC15.56■□□□□ 0.08
NR1H2P55055 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.56■□□□□ 0.08
NR1H2P55055 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NR1H2P55055 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NR1H2P55055 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NR1H2P55055 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.56■□□□□ 0.08
NR1H2P55055 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NR1H2P55055 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.56■□□□□ 0.08
NR1H2P55055 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
NR1H2P55055 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
NR1H2P55055 TK2-221ENST00000620035 5060 ntTSL 2 BASIC15.56■□□□□ 0.08
NR1H2P55055 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
NR1H2P55055 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NR1H2P55055 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NR1H2P55055 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NR1H2P55055 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NR1H2P55055 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
NR1H2P55055 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
NR1H2P55055 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.55■□□□□ 0.08
NR1H2P55055 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NR1H2P55055 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NR1H2P55055 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NR1H2P55055 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
NR1H2P55055 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.55■□□□□ 0.08
NR1H2P55055 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.55■□□□□ 0.08
NR1H2P55055 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NR1H2P55055 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NR1H2P55055 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
NR1H2P55055 TUBB8P12-201ENST00000308911 1335 ntBASIC15.55■□□□□ 0.08
NR1H2P55055 TUBB7P-202ENST00000428444 1305 ntBASIC15.55■□□□□ 0.08
NR1H2P55055 TUBB8P7-204ENST00000567960 1332 ntBASIC15.55■□□□□ 0.08
NR1H2P55055 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NR1H2P55055 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.55■□□□□ 0.08
NR1H2P55055 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.55■□□□□ 0.08
NR1H2P55055 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC15.55■□□□□ 0.08
NR1H2P55055 MEG3-211ENST00000452514 461 ntTSL 3 BASIC15.55■□□□□ 0.08
NR1H2P55055 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NR1H2P55055 AC073648.2-201ENST00000510116 352 ntBASIC15.55■□□□□ 0.08
NR1H2P55055 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
NR1H2P55055 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC15.55■□□□□ 0.08
NR1H2P55055 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.55■□□□□ 0.08
NR1H2P55055 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15.55■□□□□ 0.08
NR1H2P55055 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC15.55■□□□□ 0.08
NR1H2P55055 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
NR1H2P55055 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC15.55■□□□□ 0.08
NR1H2P55055 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC15.55■□□□□ 0.08
NR1H2P55055 BX640515.1-201ENST00000617215 977 ntBASIC15.55■□□□□ 0.08
NR1H2P55055 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NR1H2P55055 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NR1H2P55055 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NR1H2P55055 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NR1H2P55055 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
NR1H2P55055 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NR1H2P55055 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.55■□□□□ 0.08
NR1H2P55055 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.55■□□□□ 0.08
NR1H2P55055 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
NR1H2P55055 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NR1H2P55055 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NR1H2P55055 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.55■□□□□ 0.08
NR1H2P55055 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
NR1H2P55055 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
NR1H2P55055 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NR1H2P55055 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
NR1H2P55055 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NR1H2P55055 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
NR1H2P55055 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
NR1H2P55055 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.54■□□□□ 0.08
NR1H2P55055 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NR1H2P55055 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
NR1H2P55055 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC15.54■□□□□ 0.08
NR1H2P55055 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
NR1H2P55055 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms