Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ATP1B3P54709 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
ATP1B3P54709 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ATP1B3P54709 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
ATP1B3P54709 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.24□□□□□ -0.13
ATP1B3P54709 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ATP1B3P54709 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.24□□□□□ -0.13
ATP1B3P54709 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ATP1B3P54709 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ATP1B3P54709 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ATP1B3P54709 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ATP1B3P54709 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ATP1B3P54709 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
ATP1B3P54709 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ATP1B3P54709 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
ATP1B3P54709 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
ATP1B3P54709 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ATP1B3P54709 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ATP1B3P54709 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ATP1B3P54709 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC14.24□□□□□ -0.13
ATP1B3P54709 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC14.24□□□□□ -0.13
ATP1B3P54709 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ATP1B3P54709 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC14.23□□□□□ -0.13
ATP1B3P54709 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
ATP1B3P54709 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ATP1B3P54709 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
ATP1B3P54709 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ATP1B3P54709 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.23□□□□□ -0.13
ATP1B3P54709 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ATP1B3P54709 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ATP1B3P54709 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ATP1B3P54709 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ATP1B3P54709 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
ATP1B3P54709 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ATP1B3P54709 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC14.23□□□□□ -0.13
ATP1B3P54709 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ATP1B3P54709 MRPL20P1-201ENST00000400819 433 ntBASIC14.23□□□□□ -0.13
ATP1B3P54709 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
ATP1B3P54709 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.23□□□□□ -0.13
ATP1B3P54709 FAM197Y8-203ENST00000450145 560 ntBASIC14.23□□□□□ -0.13
ATP1B3P54709 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC14.23□□□□□ -0.13
ATP1B3P54709 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC14.23□□□□□ -0.13
ATP1B3P54709 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC14.23□□□□□ -0.13
ATP1B3P54709 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC14.23□□□□□ -0.13
ATP1B3P54709 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.23□□□□□ -0.13
ATP1B3P54709 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.23□□□□□ -0.13
ATP1B3P54709 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.23□□□□□ -0.13
ATP1B3P54709 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.23□□□□□ -0.13
ATP1B3P54709 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ATP1B3P54709 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
ATP1B3P54709 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ATP1B3P54709 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ATP1B3P54709 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ATP1B3P54709 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.23□□□□□ -0.13
ATP1B3P54709 AP002414.2-201ENST00000591780 3365 ntBASIC14.23□□□□□ -0.13
ATP1B3P54709 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ATP1B3P54709 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ATP1B3P54709 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ATP1B3P54709 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.23□□□□□ -0.13
ATP1B3P54709 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ATP1B3P54709 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ATP1B3P54709 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
ATP1B3P54709 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.23□□□□□ -0.13
ATP1B3P54709 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ATP1B3P54709 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
ATP1B3P54709 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.23□□□□□ -0.13
ATP1B3P54709 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ATP1B3P54709 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ATP1B3P54709 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ATP1B3P54709 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ATP1B3P54709 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
ATP1B3P54709 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ATP1B3P54709 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
ATP1B3P54709 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ATP1B3P54709 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ATP1B3P54709 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ATP1B3P54709 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ATP1B3P54709 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ATP1B3P54709 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
ATP1B3P54709 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
ATP1B3P54709 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.22□□□□□ -0.13
ATP1B3P54709 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
ATP1B3P54709 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.22□□□□□ -0.13
ATP1B3P54709 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ATP1B3P54709 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ATP1B3P54709 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
ATP1B3P54709 IPPK-202ENST00000375522 882 ntTSL 3 BASIC14.22□□□□□ -0.13
ATP1B3P54709 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
ATP1B3P54709 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC14.22□□□□□ -0.13
ATP1B3P54709 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.22□□□□□ -0.13
ATP1B3P54709 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ATP1B3P54709 RPS29-206ENST00000557111 488 ntTSL 2 BASIC14.22□□□□□ -0.13
ATP1B3P54709 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC14.22□□□□□ -0.13
ATP1B3P54709 RIN3-211ENST00000557762 517 ntTSL 3 BASIC14.22□□□□□ -0.13
ATP1B3P54709 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.22□□□□□ -0.13
ATP1B3P54709 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.22□□□□□ -0.13
ATP1B3P54709 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
ATP1B3P54709 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ATP1B3P54709 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
ATP1B3P54709 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms