Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 FAM86GP-201ENST00000448322 971 ntBASIC17.32■□□□□ 0.36
CACNA2D1P54289 AC005498.2-205ENST00000593218 784 ntBASIC17.32■□□□□ 0.36
CACNA2D1P54289 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CACNA2D1P54289 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CACNA2D1P54289 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CACNA2D1P54289 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CACNA2D1P54289 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
CACNA2D1P54289 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.32■□□□□ 0.36
CACNA2D1P54289 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.32■□□□□ 0.36
CACNA2D1P54289 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CACNA2D1P54289 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.32■□□□□ 0.36
CACNA2D1P54289 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CACNA2D1P54289 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CACNA2D1P54289 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.32■□□□□ 0.36
CACNA2D1P54289 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CACNA2D1P54289 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CACNA2D1P54289 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CACNA2D1P54289 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.31■□□□□ 0.36
CACNA2D1P54289 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CACNA2D1P54289 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CACNA2D1P54289 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CACNA2D1P54289 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.31■□□□□ 0.36
CACNA2D1P54289 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CACNA2D1P54289 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CACNA2D1P54289 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.31■□□□□ 0.36
CACNA2D1P54289 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CACNA2D1P54289 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CACNA2D1P54289 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CACNA2D1P54289 WRB-204ENST00000398753 699 ntTSL 3 BASIC17.31■□□□□ 0.36
CACNA2D1P54289 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC17.31■□□□□ 0.36
CACNA2D1P54289 CNN2P2-201ENST00000443536 909 ntBASIC17.31■□□□□ 0.36
CACNA2D1P54289 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.31■□□□□ 0.36
CACNA2D1P54289 CNN2P3-201ENST00000450201 906 ntBASIC17.31■□□□□ 0.36
CACNA2D1P54289 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CACNA2D1P54289 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.31■□□□□ 0.36
CACNA2D1P54289 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.31■□□□□ 0.36
CACNA2D1P54289 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.31■□□□□ 0.36
CACNA2D1P54289 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC17.31■□□□□ 0.36
CACNA2D1P54289 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC17.31■□□□□ 0.36
CACNA2D1P54289 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CACNA2D1P54289 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.31■□□□□ 0.36
CACNA2D1P54289 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.31■□□□□ 0.36
CACNA2D1P54289 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.31■□□□□ 0.36
CACNA2D1P54289 AL136317.3-201ENST00000618497 906 ntBASIC17.31■□□□□ 0.36
CACNA2D1P54289 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CACNA2D1P54289 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CACNA2D1P54289 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CACNA2D1P54289 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CACNA2D1P54289 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CACNA2D1P54289 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CACNA2D1P54289 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.31■□□□□ 0.36
CACNA2D1P54289 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CACNA2D1P54289 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CACNA2D1P54289 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.31■□□□□ 0.36
CACNA2D1P54289 AC092850.2-201ENST00000623821 2697 ntBASIC17.31■□□□□ 0.36
CACNA2D1P54289 PCDHA14-201ENST00000506751 2298 ntBASIC17.31■□□□□ 0.36
CACNA2D1P54289 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
CACNA2D1P54289 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CACNA2D1P54289 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CACNA2D1P54289 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CACNA2D1P54289 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CACNA2D1P54289 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CACNA2D1P54289 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CACNA2D1P54289 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CACNA2D1P54289 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CACNA2D1P54289 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CACNA2D1P54289 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.3■□□□□ 0.36
CACNA2D1P54289 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CACNA2D1P54289 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.3■□□□□ 0.36
CACNA2D1P54289 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.3■□□□□ 0.36
CACNA2D1P54289 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CACNA2D1P54289 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
CACNA2D1P54289 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CACNA2D1P54289 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CACNA2D1P54289 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.3■□□□□ 0.36
CACNA2D1P54289 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CACNA2D1P54289 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CACNA2D1P54289 AC098859.1-201ENST00000502915 1238 ntBASIC17.3■□□□□ 0.36
CACNA2D1P54289 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.3■□□□□ 0.36
CACNA2D1P54289 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC17.3■□□□□ 0.36
CACNA2D1P54289 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.3■□□□□ 0.36
CACNA2D1P54289 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CACNA2D1P54289 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CACNA2D1P54289 AL589702.1-201ENST00000641229 1509 ntBASIC17.3■□□□□ 0.36
CACNA2D1P54289 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CACNA2D1P54289 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CACNA2D1P54289 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CACNA2D1P54289 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CACNA2D1P54289 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CACNA2D1P54289 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CACNA2D1P54289 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CACNA2D1P54289 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CACNA2D1P54289 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CACNA2D1P54289 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CACNA2D1P54289 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.29■□□□□ 0.36
CACNA2D1P54289 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CACNA2D1P54289 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.29■□□□□ 0.36
CACNA2D1P54289 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CACNA2D1P54289 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.29■□□□□ 0.36
CACNA2D1P54289 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 176.9 ms