Protein–RNA interactions for Protein: P49765

VEGFB, Vascular endothelial growth factor B, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFBP49765 AP005019.2-201ENST00000615104 511 ntBASIC18.37■□□□□ 0.53
VEGFBP49765 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
VEGFBP49765 ZBTB45P2-201ENST00000452245 1531 ntBASIC18.37■□□□□ 0.53
VEGFBP49765 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
VEGFBP49765 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC18.37■□□□□ 0.53
VEGFBP49765 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.37■□□□□ 0.53
VEGFBP49765 U82695.1-201ENST00000635752 1889 ntBASIC18.37■□□□□ 0.53
VEGFBP49765 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
VEGFBP49765 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VEGFBP49765 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
VEGFBP49765 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
VEGFBP49765 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
VEGFBP49765 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.37■□□□□ 0.53
VEGFBP49765 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
VEGFBP49765 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VEGFBP49765 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
VEGFBP49765 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.36■□□□□ 0.53
VEGFBP49765 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VEGFBP49765 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC18.36■□□□□ 0.53
VEGFBP49765 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
VEGFBP49765 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
VEGFBP49765 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
VEGFBP49765 RPSAP31-201ENST00000416648 895 ntBASIC18.36■□□□□ 0.53
VEGFBP49765 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
VEGFBP49765 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
VEGFBP49765 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC18.36■□□□□ 0.53
VEGFBP49765 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VEGFBP49765 DRD5P1-201ENST00000456605 1438 ntBASIC18.36■□□□□ 0.53
VEGFBP49765 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC18.36■□□□□ 0.53
VEGFBP49765 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
VEGFBP49765 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC18.36■□□□□ 0.53
VEGFBP49765 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC18.36■□□□□ 0.53
VEGFBP49765 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC18.36■□□□□ 0.53
VEGFBP49765 RNF41-210ENST00000552244 716 ntTSL 3 BASIC18.36■□□□□ 0.53
VEGFBP49765 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
VEGFBP49765 AP001065.2-201ENST00000617205 644 ntBASIC18.36■□□□□ 0.53
VEGFBP49765 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC18.36■□□□□ 0.53
VEGFBP49765 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
VEGFBP49765 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
VEGFBP49765 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VEGFBP49765 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.36■□□□□ 0.53
VEGFBP49765 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
VEGFBP49765 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VEGFBP49765 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.35■□□□□ 0.53
VEGFBP49765 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.35■□□□□ 0.53
VEGFBP49765 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC18.35■□□□□ 0.53
VEGFBP49765 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
VEGFBP49765 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
VEGFBP49765 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VEGFBP49765 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
VEGFBP49765 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
VEGFBP49765 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
VEGFBP49765 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VEGFBP49765 AL354989.2-201ENST00000435838 1540 ntBASIC18.35■□□□□ 0.53
VEGFBP49765 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
VEGFBP49765 AL691432.1-201ENST00000596308 1422 ntBASIC18.35■□□□□ 0.53
VEGFBP49765 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VEGFBP49765 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VEGFBP49765 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC18.35■□□□□ 0.53
VEGFBP49765 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
VEGFBP49765 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VEGFBP49765 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
VEGFBP49765 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
VEGFBP49765 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VEGFBP49765 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VEGFBP49765 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC18.35■□□□□ 0.53
VEGFBP49765 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VEGFBP49765 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC18.35■□□□□ 0.53
VEGFBP49765 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VEGFBP49765 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC18.35■□□□□ 0.53
VEGFBP49765 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC18.35■□□□□ 0.53
VEGFBP49765 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC18.35■□□□□ 0.53
VEGFBP49765 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
VEGFBP49765 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC18.35■□□□□ 0.53
VEGFBP49765 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC18.35■□□□□ 0.53
VEGFBP49765 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VEGFBP49765 KLK11-210ENST00000600362 759 ntTSL 3 BASIC18.35■□□□□ 0.53
VEGFBP49765 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC18.35■□□□□ 0.53
VEGFBP49765 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VEGFBP49765 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC18.35■□□□□ 0.53
VEGFBP49765 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
VEGFBP49765 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VEGFBP49765 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
VEGFBP49765 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
VEGFBP49765 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.35■□□□□ 0.53
VEGFBP49765 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
VEGFBP49765 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
VEGFBP49765 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC18.34■□□□□ 0.53
VEGFBP49765 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC18.34■□□□□ 0.53
VEGFBP49765 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
VEGFBP49765 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC18.34■□□□□ 0.53
VEGFBP49765 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
VEGFBP49765 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VEGFBP49765 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VEGFBP49765 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
VEGFBP49765 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC18.34■□□□□ 0.53
VEGFBP49765 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VEGFBP49765 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VEGFBP49765 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VEGFBP49765 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms