Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CASP4P49662 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CASP4P49662 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CASP4P49662 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.78■□□□□ 0.44
CASP4P49662 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
CASP4P49662 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
CASP4P49662 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
CASP4P49662 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CASP4P49662 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CASP4P49662 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.78■□□□□ 0.44
CASP4P49662 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CASP4P49662 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CASP4P49662 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CASP4P49662 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.78■□□□□ 0.44
CASP4P49662 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.78■□□□□ 0.44
CASP4P49662 KRT18P13-201ENST00000400056 1290 ntBASIC17.78■□□□□ 0.44
CASP4P49662 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.78■□□□□ 0.44
CASP4P49662 AC069335.1-201ENST00000489972 472 ntBASIC17.78■□□□□ 0.44
CASP4P49662 AC105233.2-201ENST00000523697 349 ntBASIC17.78■□□□□ 0.44
CASP4P49662 AF228730.5-201ENST00000530288 346 ntBASIC17.78■□□□□ 0.44
CASP4P49662 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.78■□□□□ 0.44
CASP4P49662 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.78■□□□□ 0.44
CASP4P49662 AC022145.2-201ENST00000598203 171 ntBASIC17.78■□□□□ 0.44
CASP4P49662 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.78■□□□□ 0.44
CASP4P49662 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.78■□□□□ 0.44
CASP4P49662 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.78■□□□□ 0.44
CASP4P49662 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CASP4P49662 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
CASP4P49662 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CASP4P49662 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CASP4P49662 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.78■□□□□ 0.44
CASP4P49662 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.78■□□□□ 0.44
CASP4P49662 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CASP4P49662 LINC02447-202ENST00000501888 2146 ntBASIC17.78■□□□□ 0.44
CASP4P49662 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.78■□□□□ 0.44
CASP4P49662 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CASP4P49662 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CASP4P49662 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CASP4P49662 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CASP4P49662 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CASP4P49662 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.78■□□□□ 0.44
CASP4P49662 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.78■□□□□ 0.44
CASP4P49662 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.78■□□□□ 0.44
CASP4P49662 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.78■□□□□ 0.44
CASP4P49662 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CASP4P49662 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CASP4P49662 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CASP4P49662 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CASP4P49662 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CASP4P49662 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CASP4P49662 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CASP4P49662 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.77■□□□□ 0.44
CASP4P49662 AC112504.1-201ENST00000623415 1841 ntBASIC17.77■□□□□ 0.44
CASP4P49662 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CASP4P49662 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CASP4P49662 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CASP4P49662 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.77■□□□□ 0.44
CASP4P49662 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.77■□□□□ 0.44
CASP4P49662 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.77■□□□□ 0.44
CASP4P49662 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CASP4P49662 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC17.77■□□□□ 0.44
CASP4P49662 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CASP4P49662 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CASP4P49662 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CASP4P49662 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CASP4P49662 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.77■□□□□ 0.44
CASP4P49662 MIR346-201ENST00000362234 95 ntBASIC17.77■□□□□ 0.44
CASP4P49662 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
CASP4P49662 RN7SL589P-201ENST00000481268 310 ntBASIC17.77■□□□□ 0.44
CASP4P49662 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.77■□□□□ 0.44
CASP4P49662 AP000842.3-202ENST00000569238 1080 ntBASIC17.77■□□□□ 0.44
CASP4P49662 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.77■□□□□ 0.44
CASP4P49662 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.77■□□□□ 0.44
CASP4P49662 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.77■□□□□ 0.44
CASP4P49662 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CASP4P49662 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CASP4P49662 SPTSSB-204ENST00000617024 1292 ntBASIC17.77■□□□□ 0.44
CASP4P49662 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
CASP4P49662 AC069224.1-201ENST00000566372 1715 ntBASIC17.77■□□□□ 0.44
CASP4P49662 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
CASP4P49662 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CASP4P49662 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
CASP4P49662 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CASP4P49662 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.77■□□□□ 0.43
CASP4P49662 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.77■□□□□ 0.43
CASP4P49662 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.77■□□□□ 0.43
CASP4P49662 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.77■□□□□ 0.43
CASP4P49662 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CASP4P49662 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CASP4P49662 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC17.76■□□□□ 0.43
CASP4P49662 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
CASP4P49662 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
CASP4P49662 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CASP4P49662 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CASP4P49662 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CASP4P49662 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CASP4P49662 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
CASP4P49662 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CASP4P49662 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CASP4P49662 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms