Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
PRIM2P49643 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PRIM2P49643 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
PRIM2P49643 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PRIM2P49643 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.61■□□□□ 0.09
PRIM2P49643 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PRIM2P49643 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PRIM2P49643 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PRIM2P49643 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PRIM2P49643 AC006449.6-201ENST00000612330 2296 ntBASIC15.61■□□□□ 0.09
PRIM2P49643 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
PRIM2P49643 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PRIM2P49643 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
PRIM2P49643 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PRIM2P49643 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PRIM2P49643 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PRIM2P49643 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.61■□□□□ 0.09
PRIM2P49643 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
PRIM2P49643 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
PRIM2P49643 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PRIM2P49643 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PRIM2P49643 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
PRIM2P49643 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PRIM2P49643 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.61■□□□□ 0.09
PRIM2P49643 AC098831.1-202ENST00000438821 336 ntBASIC15.61■□□□□ 0.09
PRIM2P49643 PRSS29P-201ENST00000440800 595 ntBASIC15.61■□□□□ 0.09
PRIM2P49643 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PRIM2P49643 AC108751.1-201ENST00000490852 363 ntBASIC15.61■□□□□ 0.09
PRIM2P49643 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
PRIM2P49643 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.61■□□□□ 0.09
PRIM2P49643 MIR4751-201ENST00000578027 74 ntBASIC15.61■□□□□ 0.09
PRIM2P49643 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.61■□□□□ 0.09
PRIM2P49643 SLC25A6P4-201ENST00000586535 553 ntBASIC15.61■□□□□ 0.09
PRIM2P49643 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.61■□□□□ 0.09
PRIM2P49643 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.61■□□□□ 0.09
PRIM2P49643 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
PRIM2P49643 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.61■□□□□ 0.09
PRIM2P49643 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PRIM2P49643 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
PRIM2P49643 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
PRIM2P49643 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
PRIM2P49643 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
PRIM2P49643 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PRIM2P49643 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PRIM2P49643 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.61■□□□□ 0.09
PRIM2P49643 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PRIM2P49643 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC15.61■□□□□ 0.09
PRIM2P49643 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.61■□□□□ 0.09
PRIM2P49643 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
PRIM2P49643 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PRIM2P49643 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.61■□□□□ 0.09
PRIM2P49643 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PRIM2P49643 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.61■□□□□ 0.09
PRIM2P49643 PCGF3-213ENST00000620529 1899 ntBASIC15.61■□□□□ 0.09
PRIM2P49643 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PRIM2P49643 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
PRIM2P49643 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
PRIM2P49643 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PRIM2P49643 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.6■□□□□ 0.09
PRIM2P49643 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.6■□□□□ 0.09
PRIM2P49643 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
PRIM2P49643 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.6■□□□□ 0.09
PRIM2P49643 LINC01144-201ENST00000626198 1710 ntBASIC15.6■□□□□ 0.09
PRIM2P49643 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.6■□□□□ 0.09
PRIM2P49643 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PRIM2P49643 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.6■□□□□ 0.09
PRIM2P49643 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.6■□□□□ 0.09
PRIM2P49643 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.6■□□□□ 0.09
PRIM2P49643 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PRIM2P49643 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PRIM2P49643 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.6■□□□□ 0.09
PRIM2P49643 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.6■□□□□ 0.09
PRIM2P49643 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.6■□□□□ 0.09
PRIM2P49643 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PRIM2P49643 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PRIM2P49643 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PRIM2P49643 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PRIM2P49643 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.6■□□□□ 0.09
PRIM2P49643 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.6■□□□□ 0.09
PRIM2P49643 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PRIM2P49643 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PRIM2P49643 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.6■□□□□ 0.09
PRIM2P49643 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.6■□□□□ 0.09
PRIM2P49643 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.6■□□□□ 0.09
PRIM2P49643 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
PRIM2P49643 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
PRIM2P49643 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.6■□□□□ 0.09
PRIM2P49643 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
PRIM2P49643 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PRIM2P49643 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
PRIM2P49643 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PRIM2P49643 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.6■□□□□ 0.09
PRIM2P49643 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PRIM2P49643 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
PRIM2P49643 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PRIM2P49643 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PRIM2P49643 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PRIM2P49643 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
PRIM2P49643 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PRIM2P49643 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms