Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CX3CR1P49238 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CX3CR1P49238 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
CX3CR1P49238 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC14.41□□□□□ -0.1
CX3CR1P49238 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CX3CR1P49238 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.41□□□□□ -0.1
CX3CR1P49238 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CX3CR1P49238 AL365203.3-201ENST00000609742 2057 ntBASIC14.41□□□□□ -0.1
CX3CR1P49238 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CX3CR1P49238 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CX3CR1P49238 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CX3CR1P49238 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.41□□□□□ -0.1
CX3CR1P49238 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CX3CR1P49238 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CX3CR1P49238 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CX3CR1P49238 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.41□□□□□ -0.1
CX3CR1P49238 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.41□□□□□ -0.1
CX3CR1P49238 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.41□□□□□ -0.1
CX3CR1P49238 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CX3CR1P49238 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CX3CR1P49238 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CX3CR1P49238 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.4□□□□□ -0.1
CX3CR1P49238 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CX3CR1P49238 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CX3CR1P49238 AC024909.3-201ENST00000611513 2257 ntBASIC14.4□□□□□ -0.1
CX3CR1P49238 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CX3CR1P49238 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CX3CR1P49238 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.4□□□□□ -0.1
CX3CR1P49238 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
CX3CR1P49238 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.4□□□□□ -0.1
CX3CR1P49238 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.4□□□□□ -0.1
CX3CR1P49238 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CX3CR1P49238 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CX3CR1P49238 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CX3CR1P49238 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.4□□□□□ -0.1
CX3CR1P49238 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CX3CR1P49238 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CX3CR1P49238 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CX3CR1P49238 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CX3CR1P49238 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CX3CR1P49238 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC14.4□□□□□ -0.1
CX3CR1P49238 RNA5SP415-201ENST00000517246 115 ntBASIC14.4□□□□□ -0.1
CX3CR1P49238 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC14.4□□□□□ -0.1
CX3CR1P49238 AL662844.1-201ENST00000546340 181 ntBASIC14.4□□□□□ -0.1
CX3CR1P49238 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC14.4□□□□□ -0.1
CX3CR1P49238 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CX3CR1P49238 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC14.4□□□□□ -0.1
CX3CR1P49238 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CX3CR1P49238 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.4□□□□□ -0.1
CX3CR1P49238 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CX3CR1P49238 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CX3CR1P49238 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CX3CR1P49238 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CX3CR1P49238 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC14.4□□□□□ -0.1
CX3CR1P49238 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CX3CR1P49238 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CX3CR1P49238 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.39□□□□□ -0.11
CX3CR1P49238 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CX3CR1P49238 AC067930.6-201ENST00000623257 4947 ntBASIC14.39□□□□□ -0.11
CX3CR1P49238 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CX3CR1P49238 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CX3CR1P49238 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CX3CR1P49238 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CX3CR1P49238 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CX3CR1P49238 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.39□□□□□ -0.11
CX3CR1P49238 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CX3CR1P49238 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.39□□□□□ -0.11
CX3CR1P49238 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CX3CR1P49238 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.39□□□□□ -0.11
CX3CR1P49238 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CX3CR1P49238 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CX3CR1P49238 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CX3CR1P49238 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CX3CR1P49238 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CX3CR1P49238 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CX3CR1P49238 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC14.39□□□□□ -0.11
CX3CR1P49238 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.39□□□□□ -0.11
CX3CR1P49238 AC005622.1-201ENST00000636801 1703 ntBASIC14.39□□□□□ -0.11
CX3CR1P49238 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CX3CR1P49238 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
CX3CR1P49238 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.39□□□□□ -0.11
CX3CR1P49238 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CX3CR1P49238 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.39□□□□□ -0.11
CX3CR1P49238 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CX3CR1P49238 IGLL3P-201ENST00000412472 434 ntBASIC14.39□□□□□ -0.11
CX3CR1P49238 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC14.39□□□□□ -0.11
CX3CR1P49238 RNA5SP419-201ENST00000515908 135 ntBASIC14.39□□□□□ -0.11
CX3CR1P49238 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
CX3CR1P49238 MIR3909-201ENST00000579518 119 ntBASIC14.39□□□□□ -0.11
CX3CR1P49238 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CX3CR1P49238 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CX3CR1P49238 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.39□□□□□ -0.11
CX3CR1P49238 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CX3CR1P49238 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.39□□□□□ -0.11
CX3CR1P49238 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CX3CR1P49238 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.39□□□□□ -0.11
CX3CR1P49238 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CX3CR1P49238 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CX3CR1P49238 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CX3CR1P49238 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms