Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HMGCLP35914 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
HMGCLP35914 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.22■□□□□ 0.19
HMGCLP35914 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HMGCLP35914 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HMGCLP35914 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
HMGCLP35914 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.22■□□□□ 0.19
HMGCLP35914 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
HMGCLP35914 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
HMGCLP35914 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
HMGCLP35914 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.21■□□□□ 0.19
HMGCLP35914 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HMGCLP35914 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.21■□□□□ 0.19
HMGCLP35914 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
HMGCLP35914 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
HMGCLP35914 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HMGCLP35914 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HMGCLP35914 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HMGCLP35914 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
HMGCLP35914 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HMGCLP35914 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.21■□□□□ 0.19
HMGCLP35914 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HMGCLP35914 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.21■□□□□ 0.19
HMGCLP35914 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
HMGCLP35914 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
HMGCLP35914 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.21■□□□□ 0.19
HMGCLP35914 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HMGCLP35914 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HMGCLP35914 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.21■□□□□ 0.19
HMGCLP35914 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HMGCLP35914 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HMGCLP35914 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.21■□□□□ 0.19
HMGCLP35914 GPALPP1-207ENST00000611650 899 ntBASIC16.21■□□□□ 0.19
HMGCLP35914 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HMGCLP35914 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.21■□□□□ 0.19
HMGCLP35914 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HMGCLP35914 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HMGCLP35914 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
HMGCLP35914 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
HMGCLP35914 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HMGCLP35914 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HMGCLP35914 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
HMGCLP35914 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.21■□□□□ 0.19
HMGCLP35914 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
HMGCLP35914 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.21■□□□□ 0.18
HMGCLP35914 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
HMGCLP35914 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.18
HMGCLP35914 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
HMGCLP35914 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
HMGCLP35914 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.2■□□□□ 0.18
HMGCLP35914 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
HMGCLP35914 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HMGCLP35914 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
HMGCLP35914 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.2■□□□□ 0.18
HMGCLP35914 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HMGCLP35914 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HMGCLP35914 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HMGCLP35914 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HMGCLP35914 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
HMGCLP35914 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
HMGCLP35914 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
HMGCLP35914 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HMGCLP35914 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HMGCLP35914 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
HMGCLP35914 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.2■□□□□ 0.18
HMGCLP35914 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
HMGCLP35914 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
HMGCLP35914 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.2■□□□□ 0.18
HMGCLP35914 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
HMGCLP35914 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HMGCLP35914 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HMGCLP35914 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
HMGCLP35914 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.2■□□□□ 0.18
HMGCLP35914 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HMGCLP35914 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.2■□□□□ 0.18
HMGCLP35914 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HMGCLP35914 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.2■□□□□ 0.18
HMGCLP35914 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.2■□□□□ 0.18
HMGCLP35914 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
HMGCLP35914 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.2■□□□□ 0.18
HMGCLP35914 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.2■□□□□ 0.18
HMGCLP35914 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.2■□□□□ 0.18
HMGCLP35914 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.2■□□□□ 0.18
HMGCLP35914 AC018529.1-201ENST00000613063 361 ntBASIC16.2■□□□□ 0.18
HMGCLP35914 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
HMGCLP35914 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
HMGCLP35914 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.2■□□□□ 0.18
HMGCLP35914 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HMGCLP35914 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HMGCLP35914 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.2■□□□□ 0.18
HMGCLP35914 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
HMGCLP35914 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.2■□□□□ 0.18
HMGCLP35914 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
HMGCLP35914 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.2■□□□□ 0.18
HMGCLP35914 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HMGCLP35914 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HMGCLP35914 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
HMGCLP35914 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
HMGCLP35914 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
HMGCLP35914 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms