Protein–RNA interactions for Protein: P33991

MCM4, DNA replication licensing factor MCM4, humanhuman

Predictions only

Length 863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MCM4P33991 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MCM4P33991 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
MCM4P33991 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC19.29■□□□□ 0.68
MCM4P33991 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MCM4P33991 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MCM4P33991 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
MCM4P33991 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MCM4P33991 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
MCM4P33991 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC19.29■□□□□ 0.68
MCM4P33991 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC19.29■□□□□ 0.68
MCM4P33991 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC19.29■□□□□ 0.68
MCM4P33991 MIR4492-201ENST00000581627 80 ntBASIC19.29■□□□□ 0.68
MCM4P33991 KLK8-205ENST00000593490 267 ntTSL 3 BASIC19.29■□□□□ 0.68
MCM4P33991 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
MCM4P33991 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MCM4P33991 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MCM4P33991 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MCM4P33991 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MCM4P33991 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
MCM4P33991 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
MCM4P33991 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
MCM4P33991 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC19.29■□□□□ 0.68
MCM4P33991 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC19.28■□□□□ 0.68
MCM4P33991 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MCM4P33991 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC19.28■□□□□ 0.68
MCM4P33991 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MCM4P33991 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MCM4P33991 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MCM4P33991 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
MCM4P33991 F11R-206ENST00000621309 4770 ntTSL 5 BASIC19.28■□□□□ 0.68
MCM4P33991 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MCM4P33991 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
MCM4P33991 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MCM4P33991 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MCM4P33991 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MCM4P33991 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MCM4P33991 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
MCM4P33991 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC19.28■□□□□ 0.68
MCM4P33991 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC19.28■□□□□ 0.68
MCM4P33991 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC19.28■□□□□ 0.68
MCM4P33991 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC19.28■□□□□ 0.68
MCM4P33991 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
MCM4P33991 AC114341.1-201ENST00000618070 349 ntBASIC19.28■□□□□ 0.68
MCM4P33991 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC19.28■□□□□ 0.68
MCM4P33991 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
MCM4P33991 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MCM4P33991 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MCM4P33991 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
MCM4P33991 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MCM4P33991 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MCM4P33991 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
MCM4P33991 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC19.28■□□□□ 0.68
MCM4P33991 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
MCM4P33991 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MCM4P33991 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC19.28■□□□□ 0.68
MCM4P33991 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
MCM4P33991 AL359258.3-201ENST00000622910 2331 ntBASIC19.28■□□□□ 0.68
MCM4P33991 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
MCM4P33991 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MCM4P33991 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
MCM4P33991 RER1-203ENST00000378513 3000 ntTSL 3 BASIC19.27■□□□□ 0.68
MCM4P33991 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MCM4P33991 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
MCM4P33991 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
MCM4P33991 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC19.27■□□□□ 0.68
MCM4P33991 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
MCM4P33991 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
MCM4P33991 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MCM4P33991 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC19.27■□□□□ 0.68
MCM4P33991 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
MCM4P33991 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC19.27■□□□□ 0.68
MCM4P33991 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MCM4P33991 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MCM4P33991 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
MCM4P33991 THAP5-204ENST00000438865 868 ntTSL 2 BASIC19.27■□□□□ 0.68
MCM4P33991 SIGLEC30P-201ENST00000455569 941 ntBASIC19.27■□□□□ 0.68
MCM4P33991 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
MCM4P33991 BMF-207ENST00000559701 630 ntTSL 3 BASIC19.27■□□□□ 0.68
MCM4P33991 IGHV3OR16-7-201ENST00000604106 360 ntBASIC19.27■□□□□ 0.68
MCM4P33991 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
MCM4P33991 AL031008.1-201ENST00000619963 541 ntBASIC19.27■□□□□ 0.68
MCM4P33991 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MCM4P33991 AC007292.2-201ENST00000593524 1812 ntBASIC19.27■□□□□ 0.68
MCM4P33991 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
MCM4P33991 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
MCM4P33991 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
MCM4P33991 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC19.27■□□□□ 0.67
MCM4P33991 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
MCM4P33991 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC19.27■□□□□ 0.67
MCM4P33991 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC19.27■□□□□ 0.67
MCM4P33991 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
MCM4P33991 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
MCM4P33991 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
MCM4P33991 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC19.26■□□□□ 0.67
MCM4P33991 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MCM4P33991 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC19.26■□□□□ 0.67
MCM4P33991 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MCM4P33991 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
MCM4P33991 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
MCM4P33991 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms