Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 AGER-203ENST00000375065 665 ntTSL 2 BASIC19.97■□□□□ 0.79
TM4SF1P30408 TPO-206ENST00000382269 1155 ntTSL 5 BASIC19.97■□□□□ 0.79
TM4SF1P30408 USP40-206ENST00000443711 628 ntTSL 2 BASIC19.97■□□□□ 0.79
TM4SF1P30408 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC19.97■□□□□ 0.79
TM4SF1P30408 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
TM4SF1P30408 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TM4SF1P30408 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TM4SF1P30408 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TM4SF1P30408 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC19.97■□□□□ 0.79
TM4SF1P30408 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC19.97■□□□□ 0.79
TM4SF1P30408 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC19.97■□□□□ 0.79
TM4SF1P30408 AP001063.1-201ENST00000568332 529 ntBASIC19.97■□□□□ 0.79
TM4SF1P30408 ARL16-210ENST00000574938 751 ntTSL 2 BASIC19.97■□□□□ 0.79
TM4SF1P30408 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TM4SF1P30408 GNRHR2-203ENST00000581100 1187 ntBASIC19.97■□□□□ 0.79
TM4SF1P30408 AC243960.2-201ENST00000600996 747 ntBASIC19.97■□□□□ 0.79
TM4SF1P30408 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC19.97■□□□□ 0.79
TM4SF1P30408 RHOXF1P1-202ENST00000635473 501 ntBASIC19.97■□□□□ 0.79
TM4SF1P30408 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TM4SF1P30408 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TM4SF1P30408 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.97■□□□□ 0.79
TM4SF1P30408 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TM4SF1P30408 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TM4SF1P30408 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC19.97■□□□□ 0.79
TM4SF1P30408 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TM4SF1P30408 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TM4SF1P30408 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
TM4SF1P30408 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC19.97■□□□□ 0.79
TM4SF1P30408 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.96■□□□□ 0.79
TM4SF1P30408 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.96■□□□□ 0.79
TM4SF1P30408 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TM4SF1P30408 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TM4SF1P30408 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TM4SF1P30408 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.96■□□□□ 0.79
TM4SF1P30408 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TM4SF1P30408 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TM4SF1P30408 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.96■□□□□ 0.79
TM4SF1P30408 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TM4SF1P30408 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC19.96■□□□□ 0.79
TM4SF1P30408 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC19.96■□□□□ 0.79
TM4SF1P30408 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC19.96■□□□□ 0.79
TM4SF1P30408 HLA-DPB2-205ENST00000435074 1188 ntBASIC19.96■□□□□ 0.79
TM4SF1P30408 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC19.96■□□□□ 0.79
TM4SF1P30408 VDAC1P7-201ENST00000462417 847 ntBASIC19.96■□□□□ 0.79
TM4SF1P30408 KRT8P13-201ENST00000463294 1010 ntBASIC19.96■□□□□ 0.79
TM4SF1P30408 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC19.96■□□□□ 0.79
TM4SF1P30408 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC19.96■□□□□ 0.79
TM4SF1P30408 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC19.96■□□□□ 0.79
TM4SF1P30408 KRT90P-201ENST00000549264 1064 ntBASIC19.96■□□□□ 0.79
TM4SF1P30408 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TM4SF1P30408 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TM4SF1P30408 AC009053.2-201ENST00000563701 2365 ntBASIC19.96■□□□□ 0.79
TM4SF1P30408 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TM4SF1P30408 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
TM4SF1P30408 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TM4SF1P30408 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
TM4SF1P30408 AC105020.1-201ENST00000435356 2205 ntBASIC19.96■□□□□ 0.79
TM4SF1P30408 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TM4SF1P30408 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TM4SF1P30408 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC19.96■□□□□ 0.79
TM4SF1P30408 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
TM4SF1P30408 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC19.96■□□□□ 0.79
TM4SF1P30408 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TM4SF1P30408 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
TM4SF1P30408 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
TM4SF1P30408 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC19.95■□□□□ 0.78
TM4SF1P30408 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC19.95■□□□□ 0.78
TM4SF1P30408 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TM4SF1P30408 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TM4SF1P30408 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
TM4SF1P30408 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC19.95■□□□□ 0.78
TM4SF1P30408 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
TM4SF1P30408 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TM4SF1P30408 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TM4SF1P30408 AC006033.1-201ENST00000440505 426 ntBASIC19.95■□□□□ 0.78
TM4SF1P30408 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC19.95■□□□□ 0.78
TM4SF1P30408 AC245100.5-201ENST00000452108 331 ntBASIC19.95■□□□□ 0.78
TM4SF1P30408 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC19.95■□□□□ 0.78
TM4SF1P30408 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TM4SF1P30408 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC19.95■□□□□ 0.78
TM4SF1P30408 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TM4SF1P30408 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC19.95■□□□□ 0.78
TM4SF1P30408 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC19.95■□□□□ 0.78
TM4SF1P30408 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
TM4SF1P30408 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
TM4SF1P30408 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TM4SF1P30408 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TM4SF1P30408 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TM4SF1P30408 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TM4SF1P30408 AC005915.1-201ENST00000624912 2018 ntBASIC19.95■□□□□ 0.78
TM4SF1P30408 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TM4SF1P30408 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TM4SF1P30408 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.94■□□□□ 0.78
TM4SF1P30408 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC19.94■□□□□ 0.78
TM4SF1P30408 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TM4SF1P30408 RNF216P1-203ENST00000404404 2427 ntBASIC19.94■□□□□ 0.78
TM4SF1P30408 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TM4SF1P30408 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
TM4SF1P30408 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
TM4SF1P30408 AL592424.1-201ENST00000563624 1536 ntBASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms