Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.04□□□□□ -0.16
CD40P25942 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD40P25942 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD40P25942 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CD40P25942 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.04□□□□□ -0.16
CD40P25942 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CD40P25942 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD40P25942 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD40P25942 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD40P25942 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD40P25942 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD40P25942 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD40P25942 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD40P25942 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CD40P25942 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD40P25942 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CD40P25942 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.03□□□□□ -0.16
CD40P25942 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC14.03□□□□□ -0.16
CD40P25942 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CD40P25942 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
CD40P25942 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD40P25942 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD40P25942 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD40P25942 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.03□□□□□ -0.16
CD40P25942 AC236430.1-201ENST00000402231 743 ntBASIC14.03□□□□□ -0.16
CD40P25942 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.03□□□□□ -0.16
CD40P25942 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.03□□□□□ -0.16
CD40P25942 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.03□□□□□ -0.16
CD40P25942 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.03□□□□□ -0.16
CD40P25942 FAM207CP-201ENST00000443486 507 ntBASIC14.03□□□□□ -0.16
CD40P25942 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.03□□□□□ -0.16
CD40P25942 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CD40P25942 LHX6-205ENST00000464484 666 ntTSL 2 BASIC14.03□□□□□ -0.16
CD40P25942 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.03□□□□□ -0.16
CD40P25942 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CD40P25942 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.03□□□□□ -0.16
CD40P25942 RN7SL204P-201ENST00000582831 262 ntBASIC14.03□□□□□ -0.16
CD40P25942 AC138761.1-201ENST00000584393 385 ntBASIC14.03□□□□□ -0.16
CD40P25942 MIR4321-201ENST00000592276 80 ntBASIC14.03□□□□□ -0.16
CD40P25942 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.03□□□□□ -0.16
CD40P25942 AC087499.5-201ENST00000452760 1342 ntBASIC14.03□□□□□ -0.16
CD40P25942 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
CD40P25942 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.03□□□□□ -0.16
CD40P25942 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.03□□□□□ -0.16
CD40P25942 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD40P25942 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD40P25942 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD40P25942 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.03□□□□□ -0.16
CD40P25942 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.03□□□□□ -0.16
CD40P25942 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CD40P25942 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.03□□□□□ -0.16
CD40P25942 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CD40P25942 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
CD40P25942 AD000864.1-201ENST00000624076 2295 ntBASIC14.03□□□□□ -0.16
CD40P25942 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.03□□□□□ -0.16
CD40P25942 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC14.03□□□□□ -0.16
CD40P25942 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CD40P25942 FLJ38576-201ENST00000623820 2459 ntBASIC14.03□□□□□ -0.16
CD40P25942 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
CD40P25942 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD40P25942 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD40P25942 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CD40P25942 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CD40P25942 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CD40P25942 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CD40P25942 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CD40P25942 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CD40P25942 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CD40P25942 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
CD40P25942 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CD40P25942 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CD40P25942 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
CD40P25942 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.02□□□□□ -0.16
CD40P25942 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CD40P25942 AC022144.1-201ENST00000602255 1580 ntBASIC14.02□□□□□ -0.16
CD40P25942 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CD40P25942 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CD40P25942 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.02□□□□□ -0.17
CD40P25942 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.02□□□□□ -0.17
CD40P25942 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.02□□□□□ -0.17
CD40P25942 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CD40P25942 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CD40P25942 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CD40P25942 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
CD40P25942 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CD40P25942 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CD40P25942 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.02□□□□□ -0.17
CD40P25942 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.02□□□□□ -0.17
CD40P25942 AL080243.2-201ENST00000418783 582 ntBASIC14.02□□□□□ -0.17
CD40P25942 AC002472.2-201ENST00000442739 958 ntBASIC14.02□□□□□ -0.17
CD40P25942 AL139010.1-201ENST00000454878 894 ntBASIC14.02□□□□□ -0.17
CD40P25942 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.02□□□□□ -0.17
CD40P25942 OARD1-208ENST00000469104 704 ntTSL 2 BASIC14.02□□□□□ -0.17
CD40P25942 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.02□□□□□ -0.17
CD40P25942 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.02□□□□□ -0.17
CD40P25942 TERF1P3-201ENST00000505638 1227 ntBASIC14.02□□□□□ -0.17
CD40P25942 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.02□□□□□ -0.17
CD40P25942 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.02□□□□□ -0.17
CD40P25942 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.02□□□□□ -0.17
CD40P25942 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms