Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB4AP20338 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RAB4AP20338 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB4AP20338 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC12.59□□□□□ -0.39
RAB4AP20338 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC12.59□□□□□ -0.39
RAB4AP20338 GCK-202ENST00000345378 2421 ntTSL 2 BASIC12.59□□□□□ -0.39
RAB4AP20338 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC12.59□□□□□ -0.39
RAB4AP20338 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB4AP20338 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RAB4AP20338 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB4AP20338 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RAB4AP20338 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC12.59□□□□□ -0.39
RAB4AP20338 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB4AP20338 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RAB4AP20338 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC12.59□□□□□ -0.39
RAB4AP20338 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB4AP20338 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC12.59□□□□□ -0.39
RAB4AP20338 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RAB4AP20338 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC12.58□□□□□ -0.39
RAB4AP20338 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC12.58□□□□□ -0.39
RAB4AP20338 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RAB4AP20338 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RAB4AP20338 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RAB4AP20338 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RAB4AP20338 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC12.58□□□□□ -0.4
RAB4AP20338 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
RAB4AP20338 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
RAB4AP20338 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RAB4AP20338 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC12.58□□□□□ -0.4
RAB4AP20338 ZNF646-202ENST00000394979 8118 ntAPPRIS ALT2 BASIC12.58□□□□□ -0.4
RAB4AP20338 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RAB4AP20338 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
RAB4AP20338 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC12.58□□□□□ -0.4
RAB4AP20338 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RAB4AP20338 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC12.58□□□□□ -0.4
RAB4AP20338 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC12.58□□□□□ -0.4
RAB4AP20338 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RAB4AP20338 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RAB4AP20338 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC12.58□□□□□ -0.4
RAB4AP20338 AC112698.1-201ENST00000510299 916 ntBASIC12.58□□□□□ -0.4
RAB4AP20338 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC12.58□□□□□ -0.4
RAB4AP20338 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC12.58□□□□□ -0.4
RAB4AP20338 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC12.58□□□□□ -0.4
RAB4AP20338 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RAB4AP20338 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC12.58□□□□□ -0.4
RAB4AP20338 DECR2-212ENST00000627716 352 ntTSL 2 BASIC12.58□□□□□ -0.4
RAB4AP20338 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RAB4AP20338 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC12.58□□□□□ -0.4
RAB4AP20338 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RAB4AP20338 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
RAB4AP20338 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RAB4AP20338 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RAB4AP20338 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RAB4AP20338 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RAB4AP20338 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC12.58□□□□□ -0.4
RAB4AP20338 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RAB4AP20338 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC12.58□□□□□ -0.4
RAB4AP20338 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RAB4AP20338 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
RAB4AP20338 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAB4AP20338 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RAB4AP20338 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC12.57□□□□□ -0.4
RAB4AP20338 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC12.57□□□□□ -0.4
RAB4AP20338 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
RAB4AP20338 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAB4AP20338 BLK-205ENST00000529894 2017 ntTSL 5 BASIC12.57□□□□□ -0.4
RAB4AP20338 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
RAB4AP20338 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
RAB4AP20338 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAB4AP20338 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC12.57□□□□□ -0.4
RAB4AP20338 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RAB4AP20338 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RAB4AP20338 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAB4AP20338 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC12.57□□□□□ -0.4
RAB4AP20338 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC12.57□□□□□ -0.4
RAB4AP20338 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC12.57□□□□□ -0.4
RAB4AP20338 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAB4AP20338 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RAB4AP20338 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAB4AP20338 ICE1-201ENST00000296564 7927 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAB4AP20338 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RAB4AP20338 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RAB4AP20338 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC12.57□□□□□ -0.4
RAB4AP20338 PRR31-201ENST00000371629 978 ntTSL 2 BASIC12.57□□□□□ -0.4
RAB4AP20338 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAB4AP20338 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAB4AP20338 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC12.57□□□□□ -0.4
RAB4AP20338 AC007663.1-201ENST00000438948 1240 ntBASIC12.57□□□□□ -0.4
RAB4AP20338 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAB4AP20338 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC12.57□□□□□ -0.4
RAB4AP20338 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC12.57□□□□□ -0.4
RAB4AP20338 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC12.57□□□□□ -0.4
RAB4AP20338 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC12.57□□□□□ -0.4
RAB4AP20338 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC12.57□□□□□ -0.4
RAB4AP20338 AC116562.4-202ENST00000641738 218 ntBASIC12.57□□□□□ -0.4
RAB4AP20338 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RAB4AP20338 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC12.57□□□□□ -0.4
RAB4AP20338 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAB4AP20338 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC12.57□□□□□ -0.4
RAB4AP20338 PC-208ENST00000529047 1607 ntTSL 3 BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms