Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
VCLP18206 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VCLP18206 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
VCLP18206 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.48■□□□□ 0.23
VCLP18206 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
VCLP18206 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
VCLP18206 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
VCLP18206 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
VCLP18206 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
VCLP18206 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VCLP18206 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.47■□□□□ 0.23
VCLP18206 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
VCLP18206 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
VCLP18206 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
VCLP18206 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.47■□□□□ 0.23
VCLP18206 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.47■□□□□ 0.23
VCLP18206 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.47■□□□□ 0.23
VCLP18206 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
VCLP18206 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
VCLP18206 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
VCLP18206 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
VCLP18206 PMS2P4-201ENST00000412466 1052 ntBASIC16.47■□□□□ 0.23
VCLP18206 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.47■□□□□ 0.23
VCLP18206 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.47■□□□□ 0.23
VCLP18206 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
VCLP18206 AP002472.1-201ENST00000577490 586 ntBASIC16.47■□□□□ 0.23
VCLP18206 MIR3909-201ENST00000579518 119 ntBASIC16.47■□□□□ 0.23
VCLP18206 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.47■□□□□ 0.23
VCLP18206 LINC02228-204ENST00000642115 2962 ntBASIC16.47■□□□□ 0.23
VCLP18206 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VCLP18206 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
VCLP18206 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
VCLP18206 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
VCLP18206 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
VCLP18206 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.47■□□□□ 0.23
VCLP18206 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
VCLP18206 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
VCLP18206 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
VCLP18206 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VCLP18206 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
VCLP18206 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VCLP18206 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VCLP18206 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.46■□□□□ 0.23
VCLP18206 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
VCLP18206 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VCLP18206 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
VCLP18206 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
VCLP18206 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.46■□□□□ 0.23
VCLP18206 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
VCLP18206 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
VCLP18206 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
VCLP18206 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VCLP18206 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.46■□□□□ 0.23
VCLP18206 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VCLP18206 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VCLP18206 AC211486.1-202ENST00000416371 468 ntBASIC16.46■□□□□ 0.23
VCLP18206 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
VCLP18206 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
VCLP18206 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
VCLP18206 AC211476.1-201ENST00000503899 468 ntBASIC16.46■□□□□ 0.23
VCLP18206 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.46■□□□□ 0.23
VCLP18206 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.46■□□□□ 0.23
VCLP18206 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
VCLP18206 MIR4492-201ENST00000581627 80 ntBASIC16.46■□□□□ 0.23
VCLP18206 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.46■□□□□ 0.23
VCLP18206 AL031055.1-201ENST00000606362 631 ntBASIC16.46■□□□□ 0.23
VCLP18206 AC006538.3-201ENST00000612495 578 ntBASIC16.46■□□□□ 0.23
VCLP18206 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
VCLP18206 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VCLP18206 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
VCLP18206 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.46■□□□□ 0.23
VCLP18206 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
VCLP18206 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VCLP18206 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
VCLP18206 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.46■□□□□ 0.23
VCLP18206 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.46■□□□□ 0.22
VCLP18206 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
VCLP18206 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.45■□□□□ 0.22
VCLP18206 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VCLP18206 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
VCLP18206 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VCLP18206 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VCLP18206 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.45■□□□□ 0.22
VCLP18206 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
VCLP18206 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.45■□□□□ 0.22
VCLP18206 ELL2P1-201ENST00000413990 1906 ntBASIC16.45■□□□□ 0.22
VCLP18206 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
VCLP18206 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VCLP18206 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
VCLP18206 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VCLP18206 RNU1-129P-201ENST00000384064 167 ntBASIC16.45■□□□□ 0.22
VCLP18206 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.45■□□□□ 0.22
VCLP18206 CEND1P1-201ENST00000451006 455 ntBASIC16.45■□□□□ 0.22
VCLP18206 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.45■□□□□ 0.22
VCLP18206 ALG1L5P-201ENST00000482043 771 ntBASIC16.45■□□□□ 0.22
VCLP18206 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.45■□□□□ 0.22
VCLP18206 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.45■□□□□ 0.22
VCLP18206 FAM86C2P-203ENST00000528684 1004 ntBASIC16.45■□□□□ 0.22
VCLP18206 AC109635.5-201ENST00000533593 962 ntBASIC16.45■□□□□ 0.22
VCLP18206 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms