Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRKCAP17252 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.19■□□□□ 0.02
PRKCAP17252 BCAR1-209ENST00000546196 1340 ntBASIC15.19■□□□□ 0.02
PRKCAP17252 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PRKCAP17252 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
PRKCAP17252 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PRKCAP17252 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PRKCAP17252 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.19■□□□□ 0.02
PRKCAP17252 KRT8P39-201ENST00000396270 1433 ntBASIC15.19■□□□□ 0.02
PRKCAP17252 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PRKCAP17252 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
PRKCAP17252 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.19■□□□□ 0.02
PRKCAP17252 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.19■□□□□ 0.02
PRKCAP17252 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.19■□□□□ 0.02
PRKCAP17252 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.19■□□□□ 0.02
PRKCAP17252 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PRKCAP17252 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PRKCAP17252 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.19■□□□□ 0.02
PRKCAP17252 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PRKCAP17252 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PRKCAP17252 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PRKCAP17252 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
PRKCAP17252 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
PRKCAP17252 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PRKCAP17252 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PRKCAP17252 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.19■□□□□ 0.02
PRKCAP17252 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.19■□□□□ 0.02
PRKCAP17252 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.19■□□□□ 0.02
PRKCAP17252 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.19■□□□□ 0.02
PRKCAP17252 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.19■□□□□ 0.02
PRKCAP17252 KRT18P58-201ENST00000527480 1120 ntBASIC15.19■□□□□ 0.02
PRKCAP17252 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.19■□□□□ 0.02
PRKCAP17252 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
PRKCAP17252 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PRKCAP17252 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PRKCAP17252 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.19■□□□□ 0.02
PRKCAP17252 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PRKCAP17252 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
PRKCAP17252 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PRKCAP17252 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PRKCAP17252 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PRKCAP17252 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PRKCAP17252 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
PRKCAP17252 AC025580.3-201ENST00000617932 1424 ntBASIC15.18■□□□□ 0.02
PRKCAP17252 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PRKCAP17252 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.18■□□□□ 0.02
PRKCAP17252 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.18■□□□□ 0.02
PRKCAP17252 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PRKCAP17252 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PRKCAP17252 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
PRKCAP17252 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PRKCAP17252 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
PRKCAP17252 AL513523.2-202ENST00000427283 2040 ntBASIC15.18■□□□□ 0.02
PRKCAP17252 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.18■□□□□ 0.02
PRKCAP17252 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.18■□□□□ 0.02
PRKCAP17252 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
PRKCAP17252 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.18■□□□□ 0.02
PRKCAP17252 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PRKCAP17252 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PRKCAP17252 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
PRKCAP17252 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.18■□□□□ 0.02
PRKCAP17252 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.18■□□□□ 0.02
PRKCAP17252 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.18■□□□□ 0.02
PRKCAP17252 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.18■□□□□ 0.02
PRKCAP17252 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
PRKCAP17252 KRT19P2-202ENST00000557173 1012 ntBASIC15.18■□□□□ 0.02
PRKCAP17252 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PRKCAP17252 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
PRKCAP17252 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PRKCAP17252 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
PRKCAP17252 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.18■□□□□ 0.02
PRKCAP17252 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PRKCAP17252 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.18■□□□□ 0.02
PRKCAP17252 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PRKCAP17252 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.18■□□□□ 0.02
PRKCAP17252 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.18■□□□□ 0.02
PRKCAP17252 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PRKCAP17252 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PRKCAP17252 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.18■□□□□ 0.02
PRKCAP17252 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
PRKCAP17252 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PRKCAP17252 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
PRKCAP17252 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
PRKCAP17252 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PRKCAP17252 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
PRKCAP17252 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.17■□□□□ 0.02
PRKCAP17252 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.17■□□□□ 0.02
PRKCAP17252 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PRKCAP17252 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.17■□□□□ 0.02
PRKCAP17252 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.17■□□□□ 0.02
PRKCAP17252 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.17■□□□□ 0.02
PRKCAP17252 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PRKCAP17252 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PRKCAP17252 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
PRKCAP17252 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.17■□□□□ 0.02
PRKCAP17252 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.17■□□□□ 0.02
PRKCAP17252 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PRKCAP17252 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PRKCAP17252 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.17■□□□□ 0.02
PRKCAP17252 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms