Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MT-ND3P03897 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.72■□□□□ 0.27
MT-ND3P03897 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MT-ND3P03897 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.72■□□□□ 0.27
MT-ND3P03897 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MT-ND3P03897 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MT-ND3P03897 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MT-ND3P03897 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MT-ND3P03897 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
MT-ND3P03897 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MT-ND3P03897 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
MT-ND3P03897 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.72■□□□□ 0.27
MT-ND3P03897 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
MT-ND3P03897 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MT-ND3P03897 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.72■□□□□ 0.27
MT-ND3P03897 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
MT-ND3P03897 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.71■□□□□ 0.27
MT-ND3P03897 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MT-ND3P03897 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
MT-ND3P03897 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
MT-ND3P03897 DBET-201ENST00000630918 3363 ntBASIC16.71■□□□□ 0.27
MT-ND3P03897 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MT-ND3P03897 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
MT-ND3P03897 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MT-ND3P03897 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.71■□□□□ 0.27
MT-ND3P03897 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
MT-ND3P03897 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
MT-ND3P03897 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MT-ND3P03897 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MT-ND3P03897 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
MT-ND3P03897 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
MT-ND3P03897 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MT-ND3P03897 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MT-ND3P03897 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MT-ND3P03897 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
MT-ND3P03897 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MT-ND3P03897 MED15P5-201ENST00000423150 992 ntBASIC16.71■□□□□ 0.27
MT-ND3P03897 RNA5SP415-201ENST00000517246 115 ntBASIC16.71■□□□□ 0.27
MT-ND3P03897 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.71■□□□□ 0.27
MT-ND3P03897 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.71■□□□□ 0.27
MT-ND3P03897 MPDU1-223ENST00000582151 728 ntBASIC16.71■□□□□ 0.27
MT-ND3P03897 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.71■□□□□ 0.27
MT-ND3P03897 AC139530.3-201ENST00000620344 690 ntBASIC16.71■□□□□ 0.27
MT-ND3P03897 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MT-ND3P03897 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.71■□□□□ 0.27
MT-ND3P03897 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.71■□□□□ 0.27
MT-ND3P03897 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MT-ND3P03897 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
MT-ND3P03897 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
MT-ND3P03897 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
MT-ND3P03897 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.71■□□□□ 0.26
MT-ND3P03897 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
MT-ND3P03897 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
MT-ND3P03897 AC126177.1-201ENST00000547829 2218 ntBASIC16.7■□□□□ 0.26
MT-ND3P03897 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MT-ND3P03897 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MT-ND3P03897 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
MT-ND3P03897 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MT-ND3P03897 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MT-ND3P03897 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MT-ND3P03897 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.7■□□□□ 0.26
MT-ND3P03897 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.7■□□□□ 0.26
MT-ND3P03897 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MT-ND3P03897 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.7■□□□□ 0.26
MT-ND3P03897 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MT-ND3P03897 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MT-ND3P03897 MIR1233-2-201ENST00000408138 82 ntBASIC16.7■□□□□ 0.26
MT-ND3P03897 MIR1233-1-201ENST00000408722 82 ntBASIC16.7■□□□□ 0.26
MT-ND3P03897 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MT-ND3P03897 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.7■□□□□ 0.26
MT-ND3P03897 POU5F1P6-201ENST00000466990 990 ntBASIC16.7■□□□□ 0.26
MT-ND3P03897 BX005266.1-201ENST00000473402 457 ntBASIC16.7■□□□□ 0.26
MT-ND3P03897 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.7■□□□□ 0.26
MT-ND3P03897 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MT-ND3P03897 MIR4492-201ENST00000581627 80 ntBASIC16.7■□□□□ 0.26
MT-ND3P03897 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
MT-ND3P03897 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
MT-ND3P03897 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
MT-ND3P03897 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
MT-ND3P03897 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MT-ND3P03897 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.7■□□□□ 0.26
MT-ND3P03897 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MT-ND3P03897 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MT-ND3P03897 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
MT-ND3P03897 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.7■□□□□ 0.26
MT-ND3P03897 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MT-ND3P03897 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MT-ND3P03897 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.7■□□□□ 0.26
MT-ND3P03897 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
MT-ND3P03897 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.7■□□□□ 0.26
MT-ND3P03897 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
MT-ND3P03897 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
MT-ND3P03897 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MT-ND3P03897 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MT-ND3P03897 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MT-ND3P03897 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
MT-ND3P03897 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.69■□□□□ 0.26
MT-ND3P03897 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
MT-ND3P03897 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
MT-ND3P03897 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms