Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC14.63□□□□□ -0.07
APOA1P02647 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC14.63□□□□□ -0.07
APOA1P02647 AL139011.1-202ENST00000642063 584 ntBASIC14.63□□□□□ -0.07
APOA1P02647 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
APOA1P02647 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
APOA1P02647 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
APOA1P02647 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
APOA1P02647 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
APOA1P02647 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
APOA1P02647 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC14.63□□□□□ -0.07
APOA1P02647 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
APOA1P02647 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.63□□□□□ -0.07
APOA1P02647 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
APOA1P02647 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
APOA1P02647 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
APOA1P02647 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.63□□□□□ -0.07
APOA1P02647 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
APOA1P02647 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
APOA1P02647 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
APOA1P02647 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.62□□□□□ -0.07
APOA1P02647 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
APOA1P02647 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
APOA1P02647 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
APOA1P02647 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
APOA1P02647 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
APOA1P02647 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
APOA1P02647 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14.62□□□□□ -0.07
APOA1P02647 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC14.62□□□□□ -0.07
APOA1P02647 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
APOA1P02647 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
APOA1P02647 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
APOA1P02647 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
APOA1P02647 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.62□□□□□ -0.07
APOA1P02647 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
APOA1P02647 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
APOA1P02647 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
APOA1P02647 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.62□□□□□ -0.07
APOA1P02647 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
APOA1P02647 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
APOA1P02647 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
APOA1P02647 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
APOA1P02647 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
APOA1P02647 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
APOA1P02647 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
APOA1P02647 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
APOA1P02647 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
APOA1P02647 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
APOA1P02647 HMGA1P5-201ENST00000412453 271 ntBASIC14.62□□□□□ -0.07
APOA1P02647 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.62□□□□□ -0.07
APOA1P02647 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.62□□□□□ -0.07
APOA1P02647 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.62□□□□□ -0.07
APOA1P02647 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC14.62□□□□□ -0.07
APOA1P02647 RASA4DP-201ENST00000460726 1199 ntBASIC14.62□□□□□ -0.07
APOA1P02647 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.62□□□□□ -0.07
APOA1P02647 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
APOA1P02647 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
APOA1P02647 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
APOA1P02647 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC14.62□□□□□ -0.07
APOA1P02647 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC14.62□□□□□ -0.07
APOA1P02647 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
APOA1P02647 AC009336.1-201ENST00000608941 1553 ntBASIC14.62□□□□□ -0.07
APOA1P02647 AC092666.2-201ENST00000613287 246 ntBASIC14.62□□□□□ -0.07
APOA1P02647 LITAF-220ENST00000620789 692 ntTSL 5 BASIC14.62□□□□□ -0.07
APOA1P02647 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC14.62□□□□□ -0.07
APOA1P02647 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
APOA1P02647 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC14.62□□□□□ -0.07
APOA1P02647 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.62□□□□□ -0.07
APOA1P02647 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
APOA1P02647 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
APOA1P02647 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
APOA1P02647 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC14.62□□□□□ -0.07
APOA1P02647 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
APOA1P02647 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC14.62□□□□□ -0.07
APOA1P02647 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
APOA1P02647 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
APOA1P02647 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
APOA1P02647 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
APOA1P02647 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.61□□□□□ -0.07
APOA1P02647 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
APOA1P02647 AL021920.2-201ENST00000624828 1351 ntBASIC14.61□□□□□ -0.07
APOA1P02647 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
APOA1P02647 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
APOA1P02647 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.61□□□□□ -0.07
APOA1P02647 TMBIM7P-203ENST00000641617 1718 ntBASIC14.61□□□□□ -0.07
APOA1P02647 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
APOA1P02647 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
APOA1P02647 KRT8P10-201ENST00000450021 1447 ntBASIC14.61□□□□□ -0.07
APOA1P02647 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
APOA1P02647 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
APOA1P02647 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
APOA1P02647 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
APOA1P02647 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC14.61□□□□□ -0.07
APOA1P02647 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
APOA1P02647 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
APOA1P02647 HLA-F-220ENST00000434407 884 ntBASIC14.61□□□□□ -0.07
APOA1P02647 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC14.61□□□□□ -0.07
APOA1P02647 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
APOA1P02647 LINC02447-202ENST00000501888 2146 ntBASIC14.61□□□□□ -0.07
APOA1P02647 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
APOA1P02647 AC090192.1-201ENST00000517740 490 ntBASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms