Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE6O95741 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.05■□□□□ 0.16
CPNE6O95741 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CPNE6O95741 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE6O95741 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.05■□□□□ 0.16
CPNE6O95741 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.05■□□□□ 0.16
CPNE6O95741 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE6O95741 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE6O95741 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE6O95741 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE6O95741 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
CPNE6O95741 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CPNE6O95741 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.05■□□□□ 0.16
CPNE6O95741 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.05■□□□□ 0.16
CPNE6O95741 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
CPNE6O95741 KRT18P34-201ENST00000488218 1270 ntBASIC16.05■□□□□ 0.16
CPNE6O95741 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.05■□□□□ 0.16
CPNE6O95741 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.05■□□□□ 0.16
CPNE6O95741 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.05■□□□□ 0.16
CPNE6O95741 AC124947.2-201ENST00000547118 1133 ntBASIC16.05■□□□□ 0.16
CPNE6O95741 AC104640.1-201ENST00000562617 2109 ntBASIC16.05■□□□□ 0.16
CPNE6O95741 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE6O95741 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE6O95741 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CPNE6O95741 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE6O95741 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CPNE6O95741 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE6O95741 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE6O95741 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.05■□□□□ 0.16
CPNE6O95741 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE6O95741 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CPNE6O95741 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE6O95741 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE6O95741 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.04■□□□□ 0.16
CPNE6O95741 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE6O95741 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE6O95741 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
CPNE6O95741 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE6O95741 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE6O95741 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
CPNE6O95741 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CPNE6O95741 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE6O95741 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE6O95741 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.04■□□□□ 0.16
CPNE6O95741 FO538757.1-201ENST00000623083 1397 ntBASIC16.04■□□□□ 0.16
CPNE6O95741 AC023824.1-201ENST00000562945 2975 ntBASIC16.04■□□□□ 0.16
CPNE6O95741 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE6O95741 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE6O95741 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE6O95741 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE6O95741 TUBB8P12-201ENST00000308911 1335 ntBASIC16.04■□□□□ 0.16
CPNE6O95741 TUBB7P-202ENST00000428444 1305 ntBASIC16.04■□□□□ 0.16
CPNE6O95741 TUBB8P7-204ENST00000567960 1332 ntBASIC16.04■□□□□ 0.16
CPNE6O95741 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE6O95741 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE6O95741 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE6O95741 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE6O95741 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE6O95741 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.04■□□□□ 0.16
CPNE6O95741 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.04■□□□□ 0.16
CPNE6O95741 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.04■□□□□ 0.16
CPNE6O95741 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
CPNE6O95741 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.04■□□□□ 0.16
CPNE6O95741 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.04■□□□□ 0.16
CPNE6O95741 IGHV3-42-201ENST00000520410 361 ntBASIC16.04■□□□□ 0.16
CPNE6O95741 AC105233.2-201ENST00000523697 349 ntBASIC16.04■□□□□ 0.16
CPNE6O95741 AC069120.2-201ENST00000524091 540 ntBASIC16.04■□□□□ 0.16
CPNE6O95741 AF228730.5-201ENST00000530288 346 ntBASIC16.04■□□□□ 0.16
CPNE6O95741 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE6O95741 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.04■□□□□ 0.16
CPNE6O95741 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.04■□□□□ 0.16
CPNE6O95741 AC138761.1-201ENST00000584393 385 ntBASIC16.04■□□□□ 0.16
CPNE6O95741 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.04■□□□□ 0.16
CPNE6O95741 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE6O95741 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.04■□□□□ 0.16
CPNE6O95741 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.04■□□□□ 0.16
CPNE6O95741 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC16.04■□□□□ 0.16
CPNE6O95741 AL158211.3-201ENST00000607385 239 ntBASIC16.04■□□□□ 0.16
CPNE6O95741 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE6O95741 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.04■□□□□ 0.16
CPNE6O95741 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.04■□□□□ 0.16
CPNE6O95741 LINC02012-201ENST00000608206 1725 ntBASIC16.04■□□□□ 0.16
CPNE6O95741 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE6O95741 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.04■□□□□ 0.16
CPNE6O95741 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.04■□□□□ 0.16
CPNE6O95741 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.04■□□□□ 0.16
CPNE6O95741 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE6O95741 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE6O95741 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.04■□□□□ 0.16
CPNE6O95741 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE6O95741 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
CPNE6O95741 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE6O95741 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.03■□□□□ 0.16
CPNE6O95741 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE6O95741 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE6O95741 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE6O95741 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE6O95741 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE6O95741 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE6O95741 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms