Protein–RNA interactions for Protein: O75439

PMPCB, Mitochondrial-processing peptidase subunit beta, humanhuman

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCBO75439 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.61■□□□□ 0.25
PMPCBO75439 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PMPCBO75439 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PMPCBO75439 MTDHP5-201ENST00000598980 586 ntBASIC16.61■□□□□ 0.25
PMPCBO75439 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
PMPCBO75439 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
PMPCBO75439 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PMPCBO75439 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PMPCBO75439 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PMPCBO75439 AL592424.1-201ENST00000563624 1536 ntBASIC16.6■□□□□ 0.25
PMPCBO75439 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.6■□□□□ 0.25
PMPCBO75439 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.6■□□□□ 0.25
PMPCBO75439 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PMPCBO75439 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
PMPCBO75439 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.6■□□□□ 0.25
PMPCBO75439 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PMPCBO75439 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.6■□□□□ 0.25
PMPCBO75439 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.6■□□□□ 0.25
PMPCBO75439 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.6■□□□□ 0.25
PMPCBO75439 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PMPCBO75439 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PMPCBO75439 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.6■□□□□ 0.25
PMPCBO75439 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PMPCBO75439 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PMPCBO75439 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
PMPCBO75439 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PMPCBO75439 TFAMP1-201ENST00000412727 736 ntBASIC16.6■□□□□ 0.25
PMPCBO75439 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.6■□□□□ 0.25
PMPCBO75439 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.6■□□□□ 0.25
PMPCBO75439 AL135744.1-201ENST00000565098 629 ntBASIC16.6■□□□□ 0.25
PMPCBO75439 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
PMPCBO75439 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PMPCBO75439 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
PMPCBO75439 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.6■□□□□ 0.25
PMPCBO75439 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PMPCBO75439 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
PMPCBO75439 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PMPCBO75439 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
PMPCBO75439 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PMPCBO75439 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PMPCBO75439 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PMPCBO75439 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PMPCBO75439 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.6■□□□□ 0.25
PMPCBO75439 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.6■□□□□ 0.25
PMPCBO75439 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.6■□□□□ 0.25
PMPCBO75439 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PMPCBO75439 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PMPCBO75439 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PMPCBO75439 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
PMPCBO75439 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.6■□□□□ 0.25
PMPCBO75439 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
PMPCBO75439 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PMPCBO75439 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
PMPCBO75439 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.59■□□□□ 0.25
PMPCBO75439 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PMPCBO75439 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
PMPCBO75439 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PMPCBO75439 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PMPCBO75439 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PMPCBO75439 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.59■□□□□ 0.25
PMPCBO75439 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
PMPCBO75439 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.59■□□□□ 0.25
PMPCBO75439 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.59■□□□□ 0.25
PMPCBO75439 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PMPCBO75439 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.59■□□□□ 0.25
PMPCBO75439 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PMPCBO75439 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PMPCBO75439 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
PMPCBO75439 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PMPCBO75439 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PMPCBO75439 HTR5BP-201ENST00000430851 1154 ntBASIC16.59■□□□□ 0.25
PMPCBO75439 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.59■□□□□ 0.25
PMPCBO75439 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
PMPCBO75439 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.59■□□□□ 0.25
PMPCBO75439 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.59■□□□□ 0.25
PMPCBO75439 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.59■□□□□ 0.25
PMPCBO75439 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PMPCBO75439 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
PMPCBO75439 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.59■□□□□ 0.25
PMPCBO75439 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.59■□□□□ 0.25
PMPCBO75439 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.59■□□□□ 0.25
PMPCBO75439 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PMPCBO75439 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.59■□□□□ 0.25
PMPCBO75439 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.59■□□□□ 0.25
PMPCBO75439 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PMPCBO75439 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PMPCBO75439 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
PMPCBO75439 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PMPCBO75439 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PMPCBO75439 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PMPCBO75439 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.59■□□□□ 0.25
PMPCBO75439 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
PMPCBO75439 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.25
PMPCBO75439 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.58■□□□□ 0.25
PMPCBO75439 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PMPCBO75439 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PMPCBO75439 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PMPCBO75439 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.58■□□□□ 0.24
PMPCBO75439 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PMPCBO75439 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms