Protein–RNA interactions for Protein: O75340

PDCD6, Programmed cell death protein 6, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6O75340 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDCD6O75340 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC13.82□□□□□ -0.2
PDCD6O75340 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
PDCD6O75340 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
PDCD6O75340 PRAL-201ENST00000624952 3286 ntBASIC13.82□□□□□ -0.2
PDCD6O75340 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDCD6O75340 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDCD6O75340 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDCD6O75340 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDCD6O75340 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDCD6O75340 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
PDCD6O75340 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDCD6O75340 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDCD6O75340 PMS2P4-201ENST00000412466 1052 ntBASIC13.82□□□□□ -0.2
PDCD6O75340 FAM197Y8-203ENST00000450145 560 ntBASIC13.82□□□□□ -0.2
PDCD6O75340 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
PDCD6O75340 CXCL1P1-201ENST00000502804 216 ntBASIC13.82□□□□□ -0.2
PDCD6O75340 MOK-208ENST00000519058 917 ntTSL 2 BASIC13.82□□□□□ -0.2
PDCD6O75340 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC13.82□□□□□ -0.2
PDCD6O75340 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC13.82□□□□□ -0.2
PDCD6O75340 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC13.82□□□□□ -0.2
PDCD6O75340 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PDCD6O75340 AC012313.10-201ENST00000623509 926 ntBASIC13.82□□□□□ -0.2
PDCD6O75340 TP73-AS1-207ENST00000624167 988 ntBASIC13.82□□□□□ -0.2
PDCD6O75340 AL645728.2-201ENST00000641974 660 ntBASIC13.82□□□□□ -0.2
PDCD6O75340 MYB-201ENST00000316528 3571 ntTSL 5 BASIC13.82□□□□□ -0.2
PDCD6O75340 MYB-241ENST00000616088 3573 ntTSL 5 BASIC13.82□□□□□ -0.2
PDCD6O75340 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDCD6O75340 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDCD6O75340 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PDCD6O75340 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
PDCD6O75340 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDCD6O75340 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDCD6O75340 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDCD6O75340 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDCD6O75340 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDCD6O75340 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
PDCD6O75340 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDCD6O75340 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
PDCD6O75340 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PDCD6O75340 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
PDCD6O75340 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
PDCD6O75340 AC011270.2-201ENST00000624293 2550 ntBASIC13.81□□□□□ -0.2
PDCD6O75340 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
PDCD6O75340 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
PDCD6O75340 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC13.81□□□□□ -0.2
PDCD6O75340 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC13.81□□□□□ -0.2
PDCD6O75340 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PDCD6O75340 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
PDCD6O75340 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
PDCD6O75340 LINC00554-201ENST00000564841 3011 ntBASIC13.81□□□□□ -0.2
PDCD6O75340 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
PDCD6O75340 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
PDCD6O75340 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC13.81□□□□□ -0.2
PDCD6O75340 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PDCD6O75340 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC13.81□□□□□ -0.2
PDCD6O75340 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC13.81□□□□□ -0.2
PDCD6O75340 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PDCD6O75340 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC13.81□□□□□ -0.2
PDCD6O75340 AC126177.1-201ENST00000547829 2218 ntBASIC13.81□□□□□ -0.2
PDCD6O75340 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PDCD6O75340 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
PDCD6O75340 HMGA1P7-201ENST00000406908 502 ntBASIC13.81□□□□□ -0.2
PDCD6O75340 KRT18P67-201ENST00000432816 1264 ntBASIC13.81□□□□□ -0.2
PDCD6O75340 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
PDCD6O75340 HNRNPDP1-201ENST00000439535 754 ntBASIC13.81□□□□□ -0.2
PDCD6O75340 PRSS29P-201ENST00000440800 595 ntBASIC13.81□□□□□ -0.2
PDCD6O75340 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC13.81□□□□□ -0.2
PDCD6O75340 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC13.81□□□□□ -0.2
PDCD6O75340 AC012640.2-201ENST00000561606 901 ntBASIC13.81□□□□□ -0.2
PDCD6O75340 AL031432.2-201ENST00000566714 459 ntBASIC13.81□□□□□ -0.2
PDCD6O75340 AL928711.1-201ENST00000570165 459 ntBASIC13.81□□□□□ -0.2
PDCD6O75340 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC13.81□□□□□ -0.2
PDCD6O75340 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC13.81□□□□□ -0.2
PDCD6O75340 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
PDCD6O75340 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
PDCD6O75340 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PDCD6O75340 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
PDCD6O75340 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC13.81□□□□□ -0.2
PDCD6O75340 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PDCD6O75340 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC13.81□□□□□ -0.2
PDCD6O75340 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
PDCD6O75340 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PDCD6O75340 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
PDCD6O75340 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PDCD6O75340 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
PDCD6O75340 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PDCD6O75340 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
PDCD6O75340 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PDCD6O75340 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC13.8□□□□□ -0.2
PDCD6O75340 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC13.8□□□□□ -0.2
PDCD6O75340 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
PDCD6O75340 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PDCD6O75340 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PDCD6O75340 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
PDCD6O75340 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
PDCD6O75340 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
PDCD6O75340 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
PDCD6O75340 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC13.8□□□□□ -0.2
PDCD6O75340 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms