Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.79■□□□□ 0.12
SLC28A2O43868 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC28A2O43868 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC28A2O43868 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SLC28A2O43868 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.79■□□□□ 0.12
SLC28A2O43868 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC28A2O43868 AC092919.2-201ENST00000623631 1645 ntBASIC15.79■□□□□ 0.12
SLC28A2O43868 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
SLC28A2O43868 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SLC28A2O43868 AC006449.5-201ENST00000610658 2098 ntBASIC15.79■□□□□ 0.12
SLC28A2O43868 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.78■□□□□ 0.12
SLC28A2O43868 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC28A2O43868 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
SLC28A2O43868 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.78■□□□□ 0.12
SLC28A2O43868 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
SLC28A2O43868 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
SLC28A2O43868 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC28A2O43868 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SLC28A2O43868 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC28A2O43868 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
SLC28A2O43868 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SLC28A2O43868 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SLC28A2O43868 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.78■□□□□ 0.12
SLC28A2O43868 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC28A2O43868 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.78■□□□□ 0.12
SLC28A2O43868 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC28A2O43868 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC28A2O43868 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC28A2O43868 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SLC28A2O43868 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.78■□□□□ 0.12
SLC28A2O43868 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC28A2O43868 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC28A2O43868 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC28A2O43868 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC15.78■□□□□ 0.12
SLC28A2O43868 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC28A2O43868 PTCHD3P3-201ENST00000403073 906 ntBASIC15.78■□□□□ 0.12
SLC28A2O43868 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.78■□□□□ 0.12
SLC28A2O43868 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
SLC28A2O43868 SPDYE11-202ENST00000450699 704 ntBASIC15.78■□□□□ 0.12
SLC28A2O43868 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SLC28A2O43868 CXCL1P1-201ENST00000502804 216 ntBASIC15.78■□□□□ 0.12
SLC28A2O43868 SPDYE9P-201ENST00000570642 692 ntBASIC15.78■□□□□ 0.12
SLC28A2O43868 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.78■□□□□ 0.12
SLC28A2O43868 SPDYE10P-202ENST00000612005 668 ntBASIC15.78■□□□□ 0.12
SLC28A2O43868 SPDYE8P-202ENST00000612377 668 ntBASIC15.78■□□□□ 0.12
SLC28A2O43868 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.78■□□□□ 0.12
SLC28A2O43868 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC28A2O43868 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC28A2O43868 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC28A2O43868 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
SLC28A2O43868 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
SLC28A2O43868 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC28A2O43868 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.78■□□□□ 0.12
SLC28A2O43868 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SLC28A2O43868 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC28A2O43868 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.78■□□□□ 0.12
SLC28A2O43868 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.78■□□□□ 0.12
SLC28A2O43868 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC28A2O43868 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.78■□□□□ 0.12
SLC28A2O43868 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.78■□□□□ 0.12
SLC28A2O43868 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.78■□□□□ 0.12
SLC28A2O43868 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.78■□□□□ 0.12
SLC28A2O43868 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC28A2O43868 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
SLC28A2O43868 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SLC28A2O43868 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
SLC28A2O43868 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
SLC28A2O43868 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SLC28A2O43868 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
SLC28A2O43868 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.77■□□□□ 0.12
SLC28A2O43868 PCDH8P1-201ENST00000428983 2773 ntBASIC15.77■□□□□ 0.12
SLC28A2O43868 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.77■□□□□ 0.12
SLC28A2O43868 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
SLC28A2O43868 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
SLC28A2O43868 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.77■□□□□ 0.12
SLC28A2O43868 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.77■□□□□ 0.12
SLC28A2O43868 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
SLC28A2O43868 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.77■□□□□ 0.12
SLC28A2O43868 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.77■□□□□ 0.12
SLC28A2O43868 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
SLC28A2O43868 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SLC28A2O43868 LINC00895-201ENST00000629028 1637 ntBASIC15.77■□□□□ 0.12
SLC28A2O43868 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SLC28A2O43868 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SLC28A2O43868 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SLC28A2O43868 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SLC28A2O43868 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SLC28A2O43868 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
SLC28A2O43868 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
SLC28A2O43868 COX5BP8-201ENST00000416911 349 ntBASIC15.77■□□□□ 0.12
SLC28A2O43868 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC15.77■□□□□ 0.12
SLC28A2O43868 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SLC28A2O43868 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SLC28A2O43868 IGHV3-71-201ENST00000523324 359 ntBASIC15.77■□□□□ 0.12
SLC28A2O43868 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SLC28A2O43868 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC15.77■□□□□ 0.12
SLC28A2O43868 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.77■□□□□ 0.12
SLC28A2O43868 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SLC28A2O43868 AL662799.1-202ENST00000614205 422 ntBASIC15.77■□□□□ 0.12
SLC28A2O43868 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms