Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
SEMA3EO15041 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
SEMA3EO15041 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
SEMA3EO15041 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SEMA3EO15041 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
SEMA3EO15041 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.71
SEMA3EO15041 AC084018.2-201ENST00000613093 2607 ntBASIC19.52■□□□□ 0.71
SEMA3EO15041 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
SEMA3EO15041 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SEMA3EO15041 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC19.51■□□□□ 0.71
SEMA3EO15041 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
SEMA3EO15041 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SEMA3EO15041 AC011676.5-201ENST00000624864 2660 ntBASIC19.51■□□□□ 0.71
SEMA3EO15041 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
SEMA3EO15041 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC19.51■□□□□ 0.71
SEMA3EO15041 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SEMA3EO15041 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SEMA3EO15041 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SEMA3EO15041 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC19.51■□□□□ 0.71
SEMA3EO15041 GNAQP1-201ENST00000444815 1067 ntBASIC19.51■□□□□ 0.71
SEMA3EO15041 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC19.51■□□□□ 0.71
SEMA3EO15041 CR383656.12-201ENST00000549567 513 ntBASIC19.51■□□□□ 0.71
SEMA3EO15041 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC19.51■□□□□ 0.71
SEMA3EO15041 AC140912.1-201ENST00000577171 1054 ntBASIC19.51■□□□□ 0.71
SEMA3EO15041 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC19.51■□□□□ 0.71
SEMA3EO15041 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC19.51■□□□□ 0.71
SEMA3EO15041 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
SEMA3EO15041 AL035252.4-201ENST00000624174 288 ntBASIC19.51■□□□□ 0.71
SEMA3EO15041 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC19.51■□□□□ 0.71
SEMA3EO15041 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC19.51■□□□□ 0.71
SEMA3EO15041 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC19.51■□□□□ 0.71
SEMA3EO15041 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC19.51■□□□□ 0.71
SEMA3EO15041 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
SEMA3EO15041 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SEMA3EO15041 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC19.51■□□□□ 0.71
SEMA3EO15041 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
SEMA3EO15041 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SEMA3EO15041 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SEMA3EO15041 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SEMA3EO15041 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC19.51■□□□□ 0.71
SEMA3EO15041 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SEMA3EO15041 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
SEMA3EO15041 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SEMA3EO15041 AC124067.4-201ENST00000519691 2379 ntBASIC19.5■□□□□ 0.71
SEMA3EO15041 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
SEMA3EO15041 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SEMA3EO15041 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SEMA3EO15041 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SEMA3EO15041 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SEMA3EO15041 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
SEMA3EO15041 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
SEMA3EO15041 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
SEMA3EO15041 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SEMA3EO15041 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SEMA3EO15041 SPDYE19P-201ENST00000338590 713 ntBASIC19.5■□□□□ 0.71
SEMA3EO15041 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SEMA3EO15041 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
SEMA3EO15041 AC087499.6-201ENST00000411576 835 ntBASIC19.5■□□□□ 0.71
SEMA3EO15041 MEP1AP4-201ENST00000423244 1087 ntBASIC19.5■□□□□ 0.71
SEMA3EO15041 AC005034.1-201ENST00000426657 489 ntBASIC19.5■□□□□ 0.71
SEMA3EO15041 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
SEMA3EO15041 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC19.5■□□□□ 0.71
SEMA3EO15041 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC19.5■□□□□ 0.71
SEMA3EO15041 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC19.5■□□□□ 0.71
SEMA3EO15041 AL596325.1-201ENST00000563991 1082 ntBASIC19.5■□□□□ 0.71
SEMA3EO15041 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SEMA3EO15041 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
SEMA3EO15041 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC19.5■□□□□ 0.71
SEMA3EO15041 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
SEMA3EO15041 ALOX12P2-203ENST00000570921 1945 ntBASIC19.5■□□□□ 0.71
SEMA3EO15041 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SEMA3EO15041 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SEMA3EO15041 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC19.5■□□□□ 0.71
SEMA3EO15041 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC19.5■□□□□ 0.71
SEMA3EO15041 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SEMA3EO15041 KRT8P37-201ENST00000451609 1420 ntBASIC19.5■□□□□ 0.71
SEMA3EO15041 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SEMA3EO15041 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
SEMA3EO15041 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC19.49■□□□□ 0.71
SEMA3EO15041 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SEMA3EO15041 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SEMA3EO15041 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SEMA3EO15041 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SEMA3EO15041 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC19.49■□□□□ 0.71
SEMA3EO15041 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SEMA3EO15041 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SEMA3EO15041 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SEMA3EO15041 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC19.49■□□□□ 0.71
SEMA3EO15041 CFL1-212ENST00000531413 636 ntTSL 3 BASIC19.49■□□□□ 0.71
SEMA3EO15041 SPIB-207ENST00000597855 564 ntTSL 4 BASIC19.49■□□□□ 0.71
SEMA3EO15041 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC19.49■□□□□ 0.71
SEMA3EO15041 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC19.49■□□□□ 0.71
SEMA3EO15041 Z97205.2-201ENST00000564697 1639 ntBASIC19.49■□□□□ 0.71
SEMA3EO15041 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC19.49■□□□□ 0.71
SEMA3EO15041 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SEMA3EO15041 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SEMA3EO15041 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SEMA3EO15041 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SEMA3EO15041 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SEMA3EO15041 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms