Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CLDN5O00501 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN5O00501 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
CLDN5O00501 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.18■□□□□ 0.34
CLDN5O00501 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN5O00501 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN5O00501 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.17■□□□□ 0.34
CLDN5O00501 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
CLDN5O00501 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN5O00501 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN5O00501 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN5O00501 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.17■□□□□ 0.34
CLDN5O00501 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.17■□□□□ 0.34
CLDN5O00501 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CLDN5O00501 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN5O00501 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.17■□□□□ 0.34
CLDN5O00501 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CLDN5O00501 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
CLDN5O00501 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.17■□□□□ 0.34
CLDN5O00501 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN5O00501 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN5O00501 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
CLDN5O00501 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN5O00501 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.17■□□□□ 0.34
CLDN5O00501 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.17■□□□□ 0.34
CLDN5O00501 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CLDN5O00501 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN5O00501 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN5O00501 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN5O00501 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC17.17■□□□□ 0.34
CLDN5O00501 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC17.17■□□□□ 0.34
CLDN5O00501 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC17.17■□□□□ 0.34
CLDN5O00501 MIR4321-201ENST00000592276 80 ntBASIC17.17■□□□□ 0.34
CLDN5O00501 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN5O00501 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC17.17■□□□□ 0.34
CLDN5O00501 AL158211.3-201ENST00000607385 239 ntBASIC17.17■□□□□ 0.34
CLDN5O00501 AL138828.2-201ENST00000615812 383 ntBASIC17.17■□□□□ 0.34
CLDN5O00501 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN5O00501 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN5O00501 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.17■□□□□ 0.34
CLDN5O00501 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN5O00501 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.17■□□□□ 0.34
CLDN5O00501 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN5O00501 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN5O00501 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN5O00501 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
CLDN5O00501 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN5O00501 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN5O00501 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN5O00501 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
CLDN5O00501 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN5O00501 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC17.16■□□□□ 0.34
CLDN5O00501 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN5O00501 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
CLDN5O00501 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN5O00501 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN5O00501 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
CLDN5O00501 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC17.16■□□□□ 0.34
CLDN5O00501 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN5O00501 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.16■□□□□ 0.34
CLDN5O00501 AC027369.6-201ENST00000525520 931 ntBASIC17.16■□□□□ 0.34
CLDN5O00501 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN5O00501 AL365330.1-201ENST00000607459 531 ntBASIC17.16■□□□□ 0.34
CLDN5O00501 AC073592.8-201ENST00000624126 511 ntBASIC17.16■□□□□ 0.34
CLDN5O00501 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN5O00501 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN5O00501 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN5O00501 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN5O00501 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CLDN5O00501 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.16■□□□□ 0.34
CLDN5O00501 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN5O00501 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.16■□□□□ 0.34
CLDN5O00501 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN5O00501 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC17.16■□□□□ 0.34
CLDN5O00501 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.16■□□□□ 0.34
CLDN5O00501 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN5O00501 AL035456.1-201ENST00000456064 1369 ntBASIC17.15■□□□□ 0.34
CLDN5O00501 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.15■□□□□ 0.34
CLDN5O00501 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN5O00501 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN5O00501 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
CLDN5O00501 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.15■□□□□ 0.34
CLDN5O00501 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN5O00501 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.15■□□□□ 0.34
CLDN5O00501 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
CLDN5O00501 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN5O00501 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.15■□□□□ 0.34
CLDN5O00501 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN5O00501 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN5O00501 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN5O00501 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN5O00501 RBM39-205ENST00000397370 612 ntTSL 2 BASIC17.15■□□□□ 0.34
CLDN5O00501 WDR53-203ENST00000429115 683 ntTSL 2 BASIC17.15■□□□□ 0.34
CLDN5O00501 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.15■□□□□ 0.34
CLDN5O00501 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC17.15■□□□□ 0.34
CLDN5O00501 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC17.15■□□□□ 0.34
CLDN5O00501 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC17.15■□□□□ 0.34
CLDN5O00501 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.15■□□□□ 0.34
CLDN5O00501 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CLDN5O00501 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms