Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC13.18□□□□□ -0.3
TCRBV4S1A1TA0A5B7 MIR4515-201ENST00000584082 81 ntBASIC13.18□□□□□ -0.3
TCRBV4S1A1TA0A5B7 AL355385.1-201ENST00000606123 409 ntBASIC13.18□□□□□ -0.3
TCRBV4S1A1TA0A5B7 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TCRBV4S1A1TA0A5B7 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TCRBV4S1A1TA0A5B7 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TCRBV4S1A1TA0A5B7 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC13.18□□□□□ -0.3
TCRBV4S1A1TA0A5B7 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC13.18□□□□□ -0.3
TCRBV4S1A1TA0A5B7 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TCRBV4S1A1TA0A5B7 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TCRBV4S1A1TA0A5B7 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC13.18□□□□□ -0.3
TCRBV4S1A1TA0A5B7 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC13.18□□□□□ -0.3
TCRBV4S1A1TA0A5B7 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TCRBV4S1A1TA0A5B7 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC13.18□□□□□ -0.3
TCRBV4S1A1TA0A5B7 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TCRBV4S1A1TA0A5B7 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC13.18□□□□□ -0.3
TCRBV4S1A1TA0A5B7 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TCRBV4S1A1TA0A5B7 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
TCRBV4S1A1TA0A5B7 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TCRBV4S1A1TA0A5B7 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC13.17□□□□□ -0.3
TCRBV4S1A1TA0A5B7 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TCRBV4S1A1TA0A5B7 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
TCRBV4S1A1TA0A5B7 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TCRBV4S1A1TA0A5B7 AL365203.3-201ENST00000609742 2057 ntBASIC13.17□□□□□ -0.3
TCRBV4S1A1TA0A5B7 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
TCRBV4S1A1TA0A5B7 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TCRBV4S1A1TA0A5B7 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TCRBV4S1A1TA0A5B7 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC13.17□□□□□ -0.3
TCRBV4S1A1TA0A5B7 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TCRBV4S1A1TA0A5B7 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC13.17□□□□□ -0.3
TCRBV4S1A1TA0A5B7 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC13.17□□□□□ -0.3
TCRBV4S1A1TA0A5B7 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
TCRBV4S1A1TA0A5B7 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TCRBV4S1A1TA0A5B7 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
TCRBV4S1A1TA0A5B7 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TCRBV4S1A1TA0A5B7 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TCRBV4S1A1TA0A5B7 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC13.17□□□□□ -0.3
TCRBV4S1A1TA0A5B7 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC13.17□□□□□ -0.3
TCRBV4S1A1TA0A5B7 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC13.17□□□□□ -0.3
TCRBV4S1A1TA0A5B7 AL671277.1-201ENST00000429656 993 ntBASIC13.17□□□□□ -0.3
TCRBV4S1A1TA0A5B7 TIMM8BP1-201ENST00000452384 211 ntBASIC13.17□□□□□ -0.3
TCRBV4S1A1TA0A5B7 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TCRBV4S1A1TA0A5B7 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
TCRBV4S1A1TA0A5B7 GATB-205ENST00000508611 605 ntTSL 2 BASIC13.17□□□□□ -0.3
TCRBV4S1A1TA0A5B7 FAM86C2P-203ENST00000528684 1004 ntBASIC13.17□□□□□ -0.3
TCRBV4S1A1TA0A5B7 AC107918.2-201ENST00000530817 355 ntBASIC13.17□□□□□ -0.3
TCRBV4S1A1TA0A5B7 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC13.17□□□□□ -0.3
TCRBV4S1A1TA0A5B7 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC13.17□□□□□ -0.3
TCRBV4S1A1TA0A5B7 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC13.17□□□□□ -0.3
TCRBV4S1A1TA0A5B7 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC13.17□□□□□ -0.3
TCRBV4S1A1TA0A5B7 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
TCRBV4S1A1TA0A5B7 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC13.17□□□□□ -0.3
TCRBV4S1A1TA0A5B7 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TCRBV4S1A1TA0A5B7 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TCRBV4S1A1TA0A5B7 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC13.17□□□□□ -0.3
TCRBV4S1A1TA0A5B7 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TCRBV4S1A1TA0A5B7 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TCRBV4S1A1TA0A5B7 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC13.17□□□□□ -0.3
TCRBV4S1A1TA0A5B7 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC13.17□□□□□ -0.3
TCRBV4S1A1TA0A5B7 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TCRBV4S1A1TA0A5B7 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TCRBV4S1A1TA0A5B7 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC13.17□□□□□ -0.3
TCRBV4S1A1TA0A5B7 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TCRBV4S1A1TA0A5B7 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TCRBV4S1A1TA0A5B7 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC13.17□□□□□ -0.3
TCRBV4S1A1TA0A5B7 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TCRBV4S1A1TA0A5B7 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TCRBV4S1A1TA0A5B7 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
TCRBV4S1A1TA0A5B7 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC13.17□□□□□ -0.3
TCRBV4S1A1TA0A5B7 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TCRBV4S1A1TA0A5B7 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC13.16□□□□□ -0.3
TCRBV4S1A1TA0A5B7 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC13.16□□□□□ -0.3
TCRBV4S1A1TA0A5B7 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC13.16□□□□□ -0.3
TCRBV4S1A1TA0A5B7 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TCRBV4S1A1TA0A5B7 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC13.16□□□□□ -0.3
TCRBV4S1A1TA0A5B7 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TCRBV4S1A1TA0A5B7 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TCRBV4S1A1TA0A5B7 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC13.16□□□□□ -0.3
TCRBV4S1A1TA0A5B7 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
TCRBV4S1A1TA0A5B7 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
TCRBV4S1A1TA0A5B7 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
TCRBV4S1A1TA0A5B7 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
TCRBV4S1A1TA0A5B7 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
TCRBV4S1A1TA0A5B7 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TCRBV4S1A1TA0A5B7 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TCRBV4S1A1TA0A5B7 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
TCRBV4S1A1TA0A5B7 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
TCRBV4S1A1TA0A5B7 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC13.16□□□□□ -0.3
TCRBV4S1A1TA0A5B7 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TCRBV4S1A1TA0A5B7 PGR-209ENST00000617858 2816 ntTSL 5 BASIC13.16□□□□□ -0.3
TCRBV4S1A1TA0A5B7 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
TCRBV4S1A1TA0A5B7 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TCRBV4S1A1TA0A5B7 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TCRBV4S1A1TA0A5B7 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TCRBV4S1A1TA0A5B7 TSEN15P1-201ENST00000423257 515 ntBASIC13.16□□□□□ -0.3
TCRBV4S1A1TA0A5B7 AL645939.2-201ENST00000427340 991 ntBASIC13.16□□□□□ -0.3
TCRBV4S1A1TA0A5B7 AC140658.5-201ENST00000438532 169 ntBASIC13.16□□□□□ -0.3
TCRBV4S1A1TA0A5B7 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC13.16□□□□□ -0.3
TCRBV4S1A1TA0A5B7 SPDYE11-202ENST00000450699 704 ntBASIC13.16□□□□□ -0.3
TCRBV4S1A1TA0A5B7 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms