Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
DDX49Q9Y6V7 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC19.72■□□□□ 0.75
DDX49Q9Y6V7 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
DDX49Q9Y6V7 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC19.72■□□□□ 0.75
DDX49Q9Y6V7 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC19.71■□□□□ 0.75
DDX49Q9Y6V7 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
DDX49Q9Y6V7 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC19.71■□□□□ 0.75
DDX49Q9Y6V7 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC19.71■□□□□ 0.75
DDX49Q9Y6V7 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC19.71■□□□□ 0.75
DDX49Q9Y6V7 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC19.71■□□□□ 0.75
DDX49Q9Y6V7 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
DDX49Q9Y6V7 AMT-206ENST00000458307 1860 ntTSL 2 BASIC19.71■□□□□ 0.75
DDX49Q9Y6V7 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
DDX49Q9Y6V7 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
DDX49Q9Y6V7 AC006538.1-201ENST00000567905 1585 ntBASIC19.71■□□□□ 0.75
DDX49Q9Y6V7 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
DDX49Q9Y6V7 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
DDX49Q9Y6V7 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
DDX49Q9Y6V7 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
DDX49Q9Y6V7 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
DDX49Q9Y6V7 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
DDX49Q9Y6V7 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
DDX49Q9Y6V7 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
DDX49Q9Y6V7 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
DDX49Q9Y6V7 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC19.71■□□□□ 0.75
DDX49Q9Y6V7 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
DDX49Q9Y6V7 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC19.71■□□□□ 0.75
DDX49Q9Y6V7 CFL1-202ENST00000524553 860 ntTSL 2 BASIC19.71■□□□□ 0.75
DDX49Q9Y6V7 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
DDX49Q9Y6V7 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC19.71■□□□□ 0.75
DDX49Q9Y6V7 AC004877.2-201ENST00000623941 599 ntBASIC19.71■□□□□ 0.75
DDX49Q9Y6V7 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
DDX49Q9Y6V7 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
DDX49Q9Y6V7 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
DDX49Q9Y6V7 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
DDX49Q9Y6V7 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
DDX49Q9Y6V7 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
DDX49Q9Y6V7 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
DDX49Q9Y6V7 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.74
DDX49Q9Y6V7 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
DDX49Q9Y6V7 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
DDX49Q9Y6V7 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC19.7■□□□□ 0.74
DDX49Q9Y6V7 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC19.7■□□□□ 0.74
DDX49Q9Y6V7 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
DDX49Q9Y6V7 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
DDX49Q9Y6V7 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
DDX49Q9Y6V7 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
DDX49Q9Y6V7 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
DDX49Q9Y6V7 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
DDX49Q9Y6V7 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
DDX49Q9Y6V7 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
DDX49Q9Y6V7 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC19.7■□□□□ 0.74
DDX49Q9Y6V7 HNRNPA1P28-201ENST00000424481 961 ntBASIC19.7■□□□□ 0.74
DDX49Q9Y6V7 PRSS29P-201ENST00000440800 595 ntBASIC19.7■□□□□ 0.74
DDX49Q9Y6V7 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC19.7■□□□□ 0.74
DDX49Q9Y6V7 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC19.7■□□□□ 0.74
DDX49Q9Y6V7 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC19.7■□□□□ 0.74
DDX49Q9Y6V7 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC19.7■□□□□ 0.74
DDX49Q9Y6V7 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC19.7■□□□□ 0.74
DDX49Q9Y6V7 AC005829.1-201ENST00000570002 483 ntBASIC19.7■□□□□ 0.74
DDX49Q9Y6V7 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
DDX49Q9Y6V7 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
DDX49Q9Y6V7 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
DDX49Q9Y6V7 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
DDX49Q9Y6V7 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC19.7■□□□□ 0.74
DDX49Q9Y6V7 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
DDX49Q9Y6V7 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
DDX49Q9Y6V7 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
DDX49Q9Y6V7 NID2-208ENST00000617139 3827 ntTSL 5 BASIC19.7■□□□□ 0.74
DDX49Q9Y6V7 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC19.7■□□□□ 0.74
DDX49Q9Y6V7 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
DDX49Q9Y6V7 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
DDX49Q9Y6V7 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
DDX49Q9Y6V7 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
DDX49Q9Y6V7 AC002310.6-201ENST00000624451 1377 ntBASIC19.7■□□□□ 0.74
DDX49Q9Y6V7 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
DDX49Q9Y6V7 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
DDX49Q9Y6V7 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
DDX49Q9Y6V7 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
DDX49Q9Y6V7 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
DDX49Q9Y6V7 FES-204ENST00000414248 2327 ntTSL 2 BASIC19.69■□□□□ 0.74
DDX49Q9Y6V7 AL135999.2-201ENST00000622438 1686 ntBASIC19.69■□□□□ 0.74
DDX49Q9Y6V7 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
DDX49Q9Y6V7 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC19.69■□□□□ 0.74
DDX49Q9Y6V7 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
DDX49Q9Y6V7 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC19.69■□□□□ 0.74
DDX49Q9Y6V7 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
DDX49Q9Y6V7 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC19.69■□□□□ 0.74
DDX49Q9Y6V7 LBH-203ENST00000404397 543 ntTSL 4 BASIC19.69■□□□□ 0.74
DDX49Q9Y6V7 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC19.69■□□□□ 0.74
DDX49Q9Y6V7 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC19.69■□□□□ 0.74
DDX49Q9Y6V7 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC19.69■□□□□ 0.74
DDX49Q9Y6V7 AL355385.1-201ENST00000606123 409 ntBASIC19.69■□□□□ 0.74
DDX49Q9Y6V7 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
DDX49Q9Y6V7 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC19.69■□□□□ 0.74
DDX49Q9Y6V7 BCAR1-209ENST00000546196 1340 ntBASIC19.69■□□□□ 0.74
DDX49Q9Y6V7 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC19.69■□□□□ 0.74
DDX49Q9Y6V7 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
DDX49Q9Y6V7 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
DDX49Q9Y6V7 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms