Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC15.29■□□□□ 0.04
PCDHGA9Q9Y5G4 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.29■□□□□ 0.04
PCDHGA9Q9Y5G4 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC15.29■□□□□ 0.04
PCDHGA9Q9Y5G4 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.29■□□□□ 0.04
PCDHGA9Q9Y5G4 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.29■□□□□ 0.04
PCDHGA9Q9Y5G4 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
PCDHGA9Q9Y5G4 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGA9Q9Y5G4 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.29■□□□□ 0.04
PCDHGA9Q9Y5G4 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGA9Q9Y5G4 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.29■□□□□ 0.04
PCDHGA9Q9Y5G4 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
PCDHGA9Q9Y5G4 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGA9Q9Y5G4 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGA9Q9Y5G4 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGA9Q9Y5G4 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGA9Q9Y5G4 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGA9Q9Y5G4 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGA9Q9Y5G4 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
PCDHGA9Q9Y5G4 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGA9Q9Y5G4 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
PCDHGA9Q9Y5G4 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
PCDHGA9Q9Y5G4 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGA9Q9Y5G4 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGA9Q9Y5G4 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGA9Q9Y5G4 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGA9Q9Y5G4 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGA9Q9Y5G4 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGA9Q9Y5G4 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGA9Q9Y5G4 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGA9Q9Y5G4 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA9Q9Y5G4 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA9Q9Y5G4 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
PCDHGA9Q9Y5G4 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA9Q9Y5G4 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA9Q9Y5G4 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.28■□□□□ 0.04
PCDHGA9Q9Y5G4 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.28■□□□□ 0.04
PCDHGA9Q9Y5G4 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA9Q9Y5G4 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA9Q9Y5G4 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA9Q9Y5G4 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.28■□□□□ 0.04
PCDHGA9Q9Y5G4 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
PCDHGA9Q9Y5G4 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA9Q9Y5G4 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA9Q9Y5G4 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA9Q9Y5G4 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA9Q9Y5G4 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA9Q9Y5G4 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA9Q9Y5G4 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA9Q9Y5G4 COX5BP8-201ENST00000416911 349 ntBASIC15.28■□□□□ 0.04
PCDHGA9Q9Y5G4 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC15.28■□□□□ 0.04
PCDHGA9Q9Y5G4 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC15.28■□□□□ 0.04
PCDHGA9Q9Y5G4 HLA-J-202ENST00000469281 1241 ntBASIC15.28■□□□□ 0.04
PCDHGA9Q9Y5G4 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.28■□□□□ 0.04
PCDHGA9Q9Y5G4 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.28■□□□□ 0.04
PCDHGA9Q9Y5G4 AL359881.2-201ENST00000602973 570 ntBASIC15.28■□□□□ 0.04
PCDHGA9Q9Y5G4 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
PCDHGA9Q9Y5G4 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
PCDHGA9Q9Y5G4 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.28■□□□□ 0.04
PCDHGA9Q9Y5G4 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.28■□□□□ 0.04
PCDHGA9Q9Y5G4 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
PCDHGA9Q9Y5G4 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
PCDHGA9Q9Y5G4 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA9Q9Y5G4 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA9Q9Y5G4 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.28■□□□□ 0.04
PCDHGA9Q9Y5G4 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA9Q9Y5G4 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA9Q9Y5G4 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.28■□□□□ 0.04
PCDHGA9Q9Y5G4 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA9Q9Y5G4 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA9Q9Y5G4 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA9Q9Y5G4 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA9Q9Y5G4 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
PCDHGA9Q9Y5G4 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA9Q9Y5G4 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
PCDHGA9Q9Y5G4 AC026691.1-201ENST00000602502 2017 ntBASIC15.27■□□□□ 0.04
PCDHGA9Q9Y5G4 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.27■□□□□ 0.04
PCDHGA9Q9Y5G4 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGA9Q9Y5G4 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGA9Q9Y5G4 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGA9Q9Y5G4 CU639417.3-201ENST00000624240 1404 ntBASIC15.27■□□□□ 0.04
PCDHGA9Q9Y5G4 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.27■□□□□ 0.04
PCDHGA9Q9Y5G4 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGA9Q9Y5G4 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGA9Q9Y5G4 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
PCDHGA9Q9Y5G4 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGA9Q9Y5G4 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGA9Q9Y5G4 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.27■□□□□ 0.04
PCDHGA9Q9Y5G4 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGA9Q9Y5G4 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGA9Q9Y5G4 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGA9Q9Y5G4 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGA9Q9Y5G4 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGA9Q9Y5G4 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.27■□□□□ 0.04
PCDHGA9Q9Y5G4 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.27■□□□□ 0.04
PCDHGA9Q9Y5G4 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.27■□□□□ 0.04
PCDHGA9Q9Y5G4 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGA9Q9Y5G4 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
PCDHGA9Q9Y5G4 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
PCDHGA9Q9Y5G4 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGA9Q9Y5G4 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms