Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC18.84■□□□□ 0.61
CTDP1Q9Y5B0 AC007326.2-201ENST00000624224 7579 ntBASIC18.84■□□□□ 0.61
CTDP1Q9Y5B0 AMT-206ENST00000458307 1860 ntTSL 2 BASIC18.84■□□□□ 0.61
CTDP1Q9Y5B0 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTDP1Q9Y5B0 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
CTDP1Q9Y5B0 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CTDP1Q9Y5B0 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTDP1Q9Y5B0 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CTDP1Q9Y5B0 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTDP1Q9Y5B0 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC18.84■□□□□ 0.61
CTDP1Q9Y5B0 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CTDP1Q9Y5B0 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CTDP1Q9Y5B0 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC18.84■□□□□ 0.61
CTDP1Q9Y5B0 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTDP1Q9Y5B0 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTDP1Q9Y5B0 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC18.84■□□□□ 0.61
CTDP1Q9Y5B0 REEP4-207ENST00000523293 913 ntTSL 3 BASIC18.84■□□□□ 0.61
CTDP1Q9Y5B0 RBM7-207ENST00000544582 692 ntTSL 3 BASIC18.84■□□□□ 0.61
CTDP1Q9Y5B0 PRR29-209ENST00000582540 967 ntTSL 2 BASIC18.84■□□□□ 0.61
CTDP1Q9Y5B0 AL035252.4-201ENST00000624174 288 ntBASIC18.84■□□□□ 0.61
CTDP1Q9Y5B0 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC18.84■□□□□ 0.61
CTDP1Q9Y5B0 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTDP1Q9Y5B0 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CTDP1Q9Y5B0 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC18.84■□□□□ 0.61
CTDP1Q9Y5B0 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTDP1Q9Y5B0 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTDP1Q9Y5B0 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTDP1Q9Y5B0 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CTDP1Q9Y5B0 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CTDP1Q9Y5B0 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC18.84■□□□□ 0.61
CTDP1Q9Y5B0 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTDP1Q9Y5B0 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC18.84■□□□□ 0.61
CTDP1Q9Y5B0 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTDP1Q9Y5B0 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CTDP1Q9Y5B0 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CTDP1Q9Y5B0 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTDP1Q9Y5B0 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.84■□□□□ 0.61
CTDP1Q9Y5B0 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTDP1Q9Y5B0 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTDP1Q9Y5B0 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CTDP1Q9Y5B0 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CTDP1Q9Y5B0 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
CTDP1Q9Y5B0 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CTDP1Q9Y5B0 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC18.83■□□□□ 0.61
CTDP1Q9Y5B0 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CTDP1Q9Y5B0 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CTDP1Q9Y5B0 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CTDP1Q9Y5B0 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CTDP1Q9Y5B0 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CTDP1Q9Y5B0 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CTDP1Q9Y5B0 RBM39-205ENST00000397370 612 ntTSL 2 BASIC18.83■□□□□ 0.6
CTDP1Q9Y5B0 METTL26-204ENST00000397665 558 ntTSL 2 BASIC18.83■□□□□ 0.6
CTDP1Q9Y5B0 CENPM-206ENST00000407253 818 ntTSL 2 BASIC18.83■□□□□ 0.6
CTDP1Q9Y5B0 SERBP1P3-201ENST00000459980 809 ntBASIC18.83■□□□□ 0.6
CTDP1Q9Y5B0 RN7SL618P-201ENST00000477850 296 ntBASIC18.83■□□□□ 0.6
CTDP1Q9Y5B0 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC18.83■□□□□ 0.6
CTDP1Q9Y5B0 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC18.83■□□□□ 0.6
CTDP1Q9Y5B0 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC18.83■□□□□ 0.6
CTDP1Q9Y5B0 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC18.83■□□□□ 0.6
CTDP1Q9Y5B0 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC18.83■□□□□ 0.6
CTDP1Q9Y5B0 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CTDP1Q9Y5B0 AL358472.5-202ENST00000641448 1267 ntBASIC18.83■□□□□ 0.6
CTDP1Q9Y5B0 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC18.83■□□□□ 0.6
CTDP1Q9Y5B0 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CTDP1Q9Y5B0 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CTDP1Q9Y5B0 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CTDP1Q9Y5B0 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC18.83■□□□□ 0.6
CTDP1Q9Y5B0 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.83■□□□□ 0.6
CTDP1Q9Y5B0 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.83■□□□□ 0.6
CTDP1Q9Y5B0 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CTDP1Q9Y5B0 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CTDP1Q9Y5B0 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CTDP1Q9Y5B0 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC18.83■□□□□ 0.6
CTDP1Q9Y5B0 GGT4P-201ENST00000623672 1708 ntBASIC18.83■□□□□ 0.6
CTDP1Q9Y5B0 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CTDP1Q9Y5B0 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CTDP1Q9Y5B0 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CTDP1Q9Y5B0 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CTDP1Q9Y5B0 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CTDP1Q9Y5B0 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CTDP1Q9Y5B0 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC18.82■□□□□ 0.6
CTDP1Q9Y5B0 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CTDP1Q9Y5B0 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC18.82■□□□□ 0.6
CTDP1Q9Y5B0 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.82■□□□□ 0.6
CTDP1Q9Y5B0 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CTDP1Q9Y5B0 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.82■□□□□ 0.6
CTDP1Q9Y5B0 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CTDP1Q9Y5B0 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC18.82■□□□□ 0.6
CTDP1Q9Y5B0 AC063926.2-201ENST00000623766 1308 ntBASIC18.82■□□□□ 0.6
CTDP1Q9Y5B0 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CTDP1Q9Y5B0 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CTDP1Q9Y5B0 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CTDP1Q9Y5B0 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CTDP1Q9Y5B0 AL645608.8-201ENST00000606034 2086 ntBASIC18.82■□□□□ 0.6
CTDP1Q9Y5B0 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CTDP1Q9Y5B0 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CTDP1Q9Y5B0 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CTDP1Q9Y5B0 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC18.82■□□□□ 0.6
CTDP1Q9Y5B0 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CTDP1Q9Y5B0 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms