Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC18.11■□□□□ 0.49
BLOC1S4Q9NUP1 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC18.11■□□□□ 0.49
BLOC1S4Q9NUP1 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BLOC1S4Q9NUP1 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC18.11■□□□□ 0.49
BLOC1S4Q9NUP1 CCND1-203ENST00000536559 553 ntTSL 3 BASIC18.11■□□□□ 0.49
BLOC1S4Q9NUP1 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC18.11■□□□□ 0.49
BLOC1S4Q9NUP1 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
BLOC1S4Q9NUP1 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC18.11■□□□□ 0.49
BLOC1S4Q9NUP1 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC18.11■□□□□ 0.49
BLOC1S4Q9NUP1 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC18.11■□□□□ 0.49
BLOC1S4Q9NUP1 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC18.11■□□□□ 0.49
BLOC1S4Q9NUP1 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC18.11■□□□□ 0.49
BLOC1S4Q9NUP1 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
BLOC1S4Q9NUP1 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BLOC1S4Q9NUP1 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BLOC1S4Q9NUP1 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
BLOC1S4Q9NUP1 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC18.11■□□□□ 0.49
BLOC1S4Q9NUP1 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
BLOC1S4Q9NUP1 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BLOC1S4Q9NUP1 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BLOC1S4Q9NUP1 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BLOC1S4Q9NUP1 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
BLOC1S4Q9NUP1 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC18.11■□□□□ 0.49
BLOC1S4Q9NUP1 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC18.11■□□□□ 0.49
BLOC1S4Q9NUP1 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
BLOC1S4Q9NUP1 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
BLOC1S4Q9NUP1 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC18.1■□□□□ 0.49
BLOC1S4Q9NUP1 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
BLOC1S4Q9NUP1 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
BLOC1S4Q9NUP1 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC18.1■□□□□ 0.49
BLOC1S4Q9NUP1 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
BLOC1S4Q9NUP1 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
BLOC1S4Q9NUP1 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
BLOC1S4Q9NUP1 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
BLOC1S4Q9NUP1 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
BLOC1S4Q9NUP1 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
BLOC1S4Q9NUP1 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
BLOC1S4Q9NUP1 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
BLOC1S4Q9NUP1 CD81-202ENST00000381036 880 ntTSL 3 BASIC18.1■□□□□ 0.49
BLOC1S4Q9NUP1 KRT18P13-201ENST00000400056 1290 ntBASIC18.1■□□□□ 0.49
BLOC1S4Q9NUP1 AC005237.2-201ENST00000434368 219 ntBASIC18.1■□□□□ 0.49
BLOC1S4Q9NUP1 AP006288.1-201ENST00000446065 395 ntBASIC18.1■□□□□ 0.49
BLOC1S4Q9NUP1 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC18.1■□□□□ 0.49
BLOC1S4Q9NUP1 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
BLOC1S4Q9NUP1 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC18.1■□□□□ 0.49
BLOC1S4Q9NUP1 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC18.1■□□□□ 0.49
BLOC1S4Q9NUP1 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC18.1■□□□□ 0.49
BLOC1S4Q9NUP1 AC134684.3-201ENST00000641758 218 ntBASIC18.1■□□□□ 0.49
BLOC1S4Q9NUP1 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
BLOC1S4Q9NUP1 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
BLOC1S4Q9NUP1 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
BLOC1S4Q9NUP1 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
BLOC1S4Q9NUP1 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC18.1■□□□□ 0.49
BLOC1S4Q9NUP1 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
BLOC1S4Q9NUP1 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
BLOC1S4Q9NUP1 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
BLOC1S4Q9NUP1 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
BLOC1S4Q9NUP1 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
BLOC1S4Q9NUP1 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
BLOC1S4Q9NUP1 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
BLOC1S4Q9NUP1 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
BLOC1S4Q9NUP1 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC18.09■□□□□ 0.49
BLOC1S4Q9NUP1 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
BLOC1S4Q9NUP1 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
BLOC1S4Q9NUP1 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
BLOC1S4Q9NUP1 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
BLOC1S4Q9NUP1 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
BLOC1S4Q9NUP1 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
BLOC1S4Q9NUP1 HLA-H-201ENST00000383620 1096 ntBASIC18.09■□□□□ 0.49
BLOC1S4Q9NUP1 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BLOC1S4Q9NUP1 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC18.09■□□□□ 0.49
BLOC1S4Q9NUP1 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
BLOC1S4Q9NUP1 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC18.09■□□□□ 0.49
BLOC1S4Q9NUP1 RNA5SP410-201ENST00000516285 106 ntBASIC18.09■□□□□ 0.49
BLOC1S4Q9NUP1 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC18.09■□□□□ 0.49
BLOC1S4Q9NUP1 TSFM-210ENST00000550559 897 ntTSL 5 BASIC18.09■□□□□ 0.49
BLOC1S4Q9NUP1 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BLOC1S4Q9NUP1 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC18.09■□□□□ 0.49
BLOC1S4Q9NUP1 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC18.09■□□□□ 0.49
BLOC1S4Q9NUP1 METTL23-205ENST00000588302 925 ntTSL 5 BASIC18.09■□□□□ 0.49
BLOC1S4Q9NUP1 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC18.09■□□□□ 0.49
BLOC1S4Q9NUP1 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
BLOC1S4Q9NUP1 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BLOC1S4Q9NUP1 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BLOC1S4Q9NUP1 ACE-203ENST00000413513 2237 ntTSL 2 BASIC18.08■□□□□ 0.49
BLOC1S4Q9NUP1 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
BLOC1S4Q9NUP1 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
BLOC1S4Q9NUP1 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
BLOC1S4Q9NUP1 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
BLOC1S4Q9NUP1 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
BLOC1S4Q9NUP1 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC18.08■□□□□ 0.49
BLOC1S4Q9NUP1 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
BLOC1S4Q9NUP1 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
BLOC1S4Q9NUP1 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
BLOC1S4Q9NUP1 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
BLOC1S4Q9NUP1 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
BLOC1S4Q9NUP1 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC18.08■□□□□ 0.49
BLOC1S4Q9NUP1 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC18.08■□□□□ 0.49
BLOC1S4Q9NUP1 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
BLOC1S4Q9NUP1 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms