Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC8.26□□□□□ -1.09
CDC42SE1Q9NRR8 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC8.26□□□□□ -1.09
CDC42SE1Q9NRR8 EIF3L-214ENST00000624234 2091 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CDC42SE1Q9NRR8 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC8.26□□□□□ -1.09
CDC42SE1Q9NRR8 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC8.26□□□□□ -1.09
CDC42SE1Q9NRR8 MCFD2-212ENST00000444761 4169 ntTSL 2 BASIC8.26□□□□□ -1.09
CDC42SE1Q9NRR8 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
CDC42SE1Q9NRR8 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
CDC42SE1Q9NRR8 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
CDC42SE1Q9NRR8 GTF2IP13-202ENST00000609439 10247 ntTSL 5 BASIC8.26□□□□□ -1.09
CDC42SE1Q9NRR8 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CDC42SE1Q9NRR8 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CDC42SE1Q9NRR8 LINC00477-201ENST00000483544 1710 ntTSL 2 BASIC8.26□□□□□ -1.09
CDC42SE1Q9NRR8 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CDC42SE1Q9NRR8 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC8.26□□□□□ -1.09
CDC42SE1Q9NRR8 BTNL8-201ENST00000231229 2229 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CDC42SE1Q9NRR8 CELF1-204ENST00000395290 7666 ntAPPRIS ALT1 TSL 2 BASIC8.26□□□□□ -1.09
CDC42SE1Q9NRR8 VENTXP1-201ENST00000569334 2716 ntBASIC8.26□□□□□ -1.09
CDC42SE1Q9NRR8 GRM4-206ENST00000544773 2983 ntTSL 2 BASIC8.26□□□□□ -1.09
CDC42SE1Q9NRR8 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CDC42SE1Q9NRR8 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CDC42SE1Q9NRR8 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CDC42SE1Q9NRR8 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
CDC42SE1Q9NRR8 CCT7P1-201ENST00000406551 1611 ntBASIC8.26□□□□□ -1.09
CDC42SE1Q9NRR8 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC8.26□□□□□ -1.09
CDC42SE1Q9NRR8 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CDC42SE1Q9NRR8 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC8.26□□□□□ -1.09
CDC42SE1Q9NRR8 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CDC42SE1Q9NRR8 ACSS3-203ENST00000548058 9254 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
CDC42SE1Q9NRR8 CACNA2D2-202ENST00000360963 5272 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
CDC42SE1Q9NRR8 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CDC42SE1Q9NRR8 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
CDC42SE1Q9NRR8 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC8.26□□□□□ -1.09
CDC42SE1Q9NRR8 GTSE1-AS1-202ENST00000623117 1518 ntBASIC8.26□□□□□ -1.09
CDC42SE1Q9NRR8 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC8.26□□□□□ -1.09
CDC42SE1Q9NRR8 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC8.26□□□□□ -1.09
CDC42SE1Q9NRR8 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CDC42SE1Q9NRR8 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CDC42SE1Q9NRR8 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC8.26□□□□□ -1.09
CDC42SE1Q9NRR8 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CDC42SE1Q9NRR8 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CDC42SE1Q9NRR8 THA1P-201ENST00000590384 1145 ntBASIC8.26□□□□□ -1.09
CDC42SE1Q9NRR8 DUX4L11-201ENST00000611504 1267 ntBASIC8.26□□□□□ -1.09
CDC42SE1Q9NRR8 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
CDC42SE1Q9NRR8 DUX4L12-201ENST00000614593 1267 ntBASIC8.26□□□□□ -1.09
CDC42SE1Q9NRR8 DUX4L14-201ENST00000621227 1267 ntBASIC8.26□□□□□ -1.09
CDC42SE1Q9NRR8 AC004241.5-201ENST00000623870 2448 ntBASIC8.26□□□□□ -1.09
CDC42SE1Q9NRR8 SRPK3-208ENST00000489426 4479 ntAPPRIS ALT2 TSL 2 BASIC8.26□□□□□ -1.09
CDC42SE1Q9NRR8 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC8.26□□□□□ -1.09
CDC42SE1Q9NRR8 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CDC42SE1Q9NRR8 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC8.26□□□□□ -1.09
CDC42SE1Q9NRR8 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CDC42SE1Q9NRR8 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC8.26□□□□□ -1.09
CDC42SE1Q9NRR8 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CDC42SE1Q9NRR8 ZNF740-201ENST00000416904 8578 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CDC42SE1Q9NRR8 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC8.26□□□□□ -1.09
CDC42SE1Q9NRR8 DOK4-210ENST00000566936 2851 ntTSL 3 BASIC8.26□□□□□ -1.09
CDC42SE1Q9NRR8 DLEC1-201ENST00000308059 6426 ntAPPRIS P2 TSL 1 (best) BASIC8.26□□□□□ -1.09
CDC42SE1Q9NRR8 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC8.26□□□□□ -1.09
CDC42SE1Q9NRR8 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC8.26□□□□□ -1.09
CDC42SE1Q9NRR8 RBM15-205ENST00000618772 3431 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CDC42SE1Q9NRR8 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CDC42SE1Q9NRR8 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CDC42SE1Q9NRR8 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
CDC42SE1Q9NRR8 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC8.26□□□□□ -1.09
CDC42SE1Q9NRR8 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CDC42SE1Q9NRR8 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CDC42SE1Q9NRR8 AC099343.3-201ENST00000605834 2503 ntBASIC8.26□□□□□ -1.09
CDC42SE1Q9NRR8 DNAJC11-202ENST00000377577 3311 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CDC42SE1Q9NRR8 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC8.26□□□□□ -1.09
CDC42SE1Q9NRR8 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CDC42SE1Q9NRR8 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC8.26□□□□□ -1.09
CDC42SE1Q9NRR8 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC8.26□□□□□ -1.09
CDC42SE1Q9NRR8 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC8.26□□□□□ -1.09
CDC42SE1Q9NRR8 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CDC42SE1Q9NRR8 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CDC42SE1Q9NRR8 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC8.26□□□□□ -1.09
CDC42SE1Q9NRR8 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
CDC42SE1Q9NRR8 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CDC42SE1Q9NRR8 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CDC42SE1Q9NRR8 C22orf39-202ENST00000399562 3350 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CDC42SE1Q9NRR8 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CDC42SE1Q9NRR8 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CDC42SE1Q9NRR8 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC8.25□□□□□ -1.09
CDC42SE1Q9NRR8 IYD-208ENST00000500320 2158 ntTSL 2 BASIC8.25□□□□□ -1.09
CDC42SE1Q9NRR8 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC8.25□□□□□ -1.09
CDC42SE1Q9NRR8 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
CDC42SE1Q9NRR8 SYDE1-203ENST00000600252 3832 ntTSL 2 BASIC8.25□□□□□ -1.09
CDC42SE1Q9NRR8 PNPLA6-204ENST00000545201 4502 ntTSL 2 BASIC8.25□□□□□ -1.09
CDC42SE1Q9NRR8 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CDC42SE1Q9NRR8 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
CDC42SE1Q9NRR8 PCDHB18P-202ENST00000526308 3197 ntBASIC8.25□□□□□ -1.09
CDC42SE1Q9NRR8 HERC3-203ENST00000407637 2634 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CDC42SE1Q9NRR8 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
CDC42SE1Q9NRR8 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CDC42SE1Q9NRR8 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
CDC42SE1Q9NRR8 MPI-203ENST00000535694 1523 ntTSL 2 BASIC8.25□□□□□ -1.09
CDC42SE1Q9NRR8 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CDC42SE1Q9NRR8 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC8.25□□□□□ -1.09
CDC42SE1Q9NRR8 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms