Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
BRF2Q9HAW0 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.63■□□□□ 0.09
BRF2Q9HAW0 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
BRF2Q9HAW0 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
BRF2Q9HAW0 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
BRF2Q9HAW0 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
BRF2Q9HAW0 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
BRF2Q9HAW0 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
BRF2Q9HAW0 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
BRF2Q9HAW0 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
BRF2Q9HAW0 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.63■□□□□ 0.09
BRF2Q9HAW0 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
BRF2Q9HAW0 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
BRF2Q9HAW0 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
BRF2Q9HAW0 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.63■□□□□ 0.09
BRF2Q9HAW0 TEX30-205ENST00000376029 959 ntTSL 2 BASIC15.63■□□□□ 0.09
BRF2Q9HAW0 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
BRF2Q9HAW0 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
BRF2Q9HAW0 HAUS4P1-201ENST00000406739 1145 ntBASIC15.63■□□□□ 0.09
BRF2Q9HAW0 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.63■□□□□ 0.09
BRF2Q9HAW0 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
BRF2Q9HAW0 SLC25A1P1-201ENST00000528351 927 ntBASIC15.63■□□□□ 0.09
BRF2Q9HAW0 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
BRF2Q9HAW0 AL513190.1-201ENST00000621254 727 ntBASIC15.63■□□□□ 0.09
BRF2Q9HAW0 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
BRF2Q9HAW0 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
BRF2Q9HAW0 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
BRF2Q9HAW0 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.63■□□□□ 0.09
BRF2Q9HAW0 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.63■□□□□ 0.09
BRF2Q9HAW0 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
BRF2Q9HAW0 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
BRF2Q9HAW0 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
BRF2Q9HAW0 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.63■□□□□ 0.09
BRF2Q9HAW0 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
BRF2Q9HAW0 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
BRF2Q9HAW0 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.63■□□□□ 0.09
BRF2Q9HAW0 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
BRF2Q9HAW0 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
BRF2Q9HAW0 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.62■□□□□ 0.09
BRF2Q9HAW0 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
BRF2Q9HAW0 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
BRF2Q9HAW0 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
BRF2Q9HAW0 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
BRF2Q9HAW0 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
BRF2Q9HAW0 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
BRF2Q9HAW0 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
BRF2Q9HAW0 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.62■□□□□ 0.09
BRF2Q9HAW0 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
BRF2Q9HAW0 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
BRF2Q9HAW0 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
BRF2Q9HAW0 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.62■□□□□ 0.09
BRF2Q9HAW0 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.62■□□□□ 0.09
BRF2Q9HAW0 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
BRF2Q9HAW0 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
BRF2Q9HAW0 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
BRF2Q9HAW0 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.62■□□□□ 0.09
BRF2Q9HAW0 RARRES2P8-201ENST00000566335 367 ntBASIC15.62■□□□□ 0.09
BRF2Q9HAW0 MIR4321-201ENST00000592276 80 ntBASIC15.62■□□□□ 0.09
BRF2Q9HAW0 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.62■□□□□ 0.09
BRF2Q9HAW0 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.62■□□□□ 0.09
BRF2Q9HAW0 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
BRF2Q9HAW0 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
BRF2Q9HAW0 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
BRF2Q9HAW0 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
BRF2Q9HAW0 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
BRF2Q9HAW0 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.62■□□□□ 0.09
BRF2Q9HAW0 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
BRF2Q9HAW0 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.62■□□□□ 0.09
BRF2Q9HAW0 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
BRF2Q9HAW0 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
BRF2Q9HAW0 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
BRF2Q9HAW0 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
BRF2Q9HAW0 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
BRF2Q9HAW0 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
BRF2Q9HAW0 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
BRF2Q9HAW0 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.62■□□□□ 0.09
BRF2Q9HAW0 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
BRF2Q9HAW0 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.61■□□□□ 0.09
BRF2Q9HAW0 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.61■□□□□ 0.09
BRF2Q9HAW0 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
BRF2Q9HAW0 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
BRF2Q9HAW0 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
BRF2Q9HAW0 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
BRF2Q9HAW0 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
BRF2Q9HAW0 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
BRF2Q9HAW0 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
BRF2Q9HAW0 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.61■□□□□ 0.09
BRF2Q9HAW0 AP005117.1-202ENST00000581724 1908 ntBASIC15.61■□□□□ 0.09
BRF2Q9HAW0 AC008741.2-201ENST00000612792 3115 ntBASIC15.61■□□□□ 0.09
BRF2Q9HAW0 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
BRF2Q9HAW0 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
BRF2Q9HAW0 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
BRF2Q9HAW0 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
BRF2Q9HAW0 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
BRF2Q9HAW0 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.61■□□□□ 0.09
BRF2Q9HAW0 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.61■□□□□ 0.09
BRF2Q9HAW0 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
BRF2Q9HAW0 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.61■□□□□ 0.09
BRF2Q9HAW0 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
BRF2Q9HAW0 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms