Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CHRDL1Q9BU40 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC13.07□□□□□ -0.32
CHRDL1Q9BU40 AC012640.2-201ENST00000561606 901 ntBASIC13.07□□□□□ -0.32
CHRDL1Q9BU40 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC13.07□□□□□ -0.32
CHRDL1Q9BU40 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC13.07□□□□□ -0.32
CHRDL1Q9BU40 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CHRDL1Q9BU40 AL031008.1-201ENST00000619963 541 ntBASIC13.07□□□□□ -0.32
CHRDL1Q9BU40 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC13.07□□□□□ -0.32
CHRDL1Q9BU40 VPS51-217ENST00000639871 243 ntTSL 5 BASIC13.07□□□□□ -0.32
CHRDL1Q9BU40 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC13.07□□□□□ -0.32
CHRDL1Q9BU40 AP002414.3-201ENST00000589352 1468 ntBASIC13.07□□□□□ -0.32
CHRDL1Q9BU40 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CHRDL1Q9BU40 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC13.07□□□□□ -0.32
CHRDL1Q9BU40 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CHRDL1Q9BU40 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
CHRDL1Q9BU40 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CHRDL1Q9BU40 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC13.07□□□□□ -0.32
CHRDL1Q9BU40 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CHRDL1Q9BU40 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
CHRDL1Q9BU40 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC13.07□□□□□ -0.32
CHRDL1Q9BU40 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
CHRDL1Q9BU40 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CHRDL1Q9BU40 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CHRDL1Q9BU40 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CHRDL1Q9BU40 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
CHRDL1Q9BU40 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CHRDL1Q9BU40 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CHRDL1Q9BU40 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
CHRDL1Q9BU40 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC13.06□□□□□ -0.32
CHRDL1Q9BU40 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CHRDL1Q9BU40 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC13.06□□□□□ -0.32
CHRDL1Q9BU40 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CHRDL1Q9BU40 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CHRDL1Q9BU40 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CHRDL1Q9BU40 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC13.06□□□□□ -0.32
CHRDL1Q9BU40 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC13.06□□□□□ -0.32
CHRDL1Q9BU40 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC13.06□□□□□ -0.32
CHRDL1Q9BU40 AC104640.1-201ENST00000562617 2109 ntBASIC13.06□□□□□ -0.32
CHRDL1Q9BU40 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CHRDL1Q9BU40 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CHRDL1Q9BU40 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CHRDL1Q9BU40 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC13.06□□□□□ -0.32
CHRDL1Q9BU40 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CHRDL1Q9BU40 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CHRDL1Q9BU40 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CHRDL1Q9BU40 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC13.06□□□□□ -0.32
CHRDL1Q9BU40 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC13.06□□□□□ -0.32
CHRDL1Q9BU40 MED22-202ENST00000371999 987 ntTSL 3 BASIC13.06□□□□□ -0.32
CHRDL1Q9BU40 INIP-202ENST00000374236 874 ntTSL 2 BASIC13.06□□□□□ -0.32
CHRDL1Q9BU40 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC13.06□□□□□ -0.32
CHRDL1Q9BU40 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CHRDL1Q9BU40 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC13.06□□□□□ -0.32
CHRDL1Q9BU40 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CHRDL1Q9BU40 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC13.06□□□□□ -0.32
CHRDL1Q9BU40 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC13.06□□□□□ -0.32
CHRDL1Q9BU40 AC105339.3-201ENST00000560043 636 ntBASIC13.06□□□□□ -0.32
CHRDL1Q9BU40 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC13.06□□□□□ -0.32
CHRDL1Q9BU40 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC13.06□□□□□ -0.32
CHRDL1Q9BU40 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC13.06□□□□□ -0.32
CHRDL1Q9BU40 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CHRDL1Q9BU40 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
CHRDL1Q9BU40 AL356488.2-201ENST00000602755 427 ntBASIC13.06□□□□□ -0.32
CHRDL1Q9BU40 MIR1199-201ENST00000621445 119 ntBASIC13.06□□□□□ -0.32
CHRDL1Q9BU40 REXO1L3P-201ENST00000622202 1288 ntBASIC13.06□□□□□ -0.32
CHRDL1Q9BU40 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC13.06□□□□□ -0.32
CHRDL1Q9BU40 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CHRDL1Q9BU40 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
CHRDL1Q9BU40 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CHRDL1Q9BU40 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CHRDL1Q9BU40 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CHRDL1Q9BU40 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
CHRDL1Q9BU40 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC13.06□□□□□ -0.32
CHRDL1Q9BU40 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CHRDL1Q9BU40 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CHRDL1Q9BU40 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CHRDL1Q9BU40 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC13.06□□□□□ -0.32
CHRDL1Q9BU40 MTHFR-217ENST00000641820 1569 ntBASIC13.06□□□□□ -0.32
CHRDL1Q9BU40 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CHRDL1Q9BU40 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CHRDL1Q9BU40 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC13.06□□□□□ -0.32
CHRDL1Q9BU40 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CHRDL1Q9BU40 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC13.06□□□□□ -0.32
CHRDL1Q9BU40 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC13.06□□□□□ -0.32
CHRDL1Q9BU40 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CHRDL1Q9BU40 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CHRDL1Q9BU40 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CHRDL1Q9BU40 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CHRDL1Q9BU40 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
CHRDL1Q9BU40 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC13.05□□□□□ -0.32
CHRDL1Q9BU40 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
CHRDL1Q9BU40 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CHRDL1Q9BU40 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CHRDL1Q9BU40 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CHRDL1Q9BU40 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
CHRDL1Q9BU40 AC024909.3-201ENST00000611513 2257 ntBASIC13.05□□□□□ -0.32
CHRDL1Q9BU40 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC13.05□□□□□ -0.32
CHRDL1Q9BU40 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
CHRDL1Q9BU40 HARS-204ENST00000438307 1789 ntTSL 2 BASIC13.05□□□□□ -0.32
CHRDL1Q9BU40 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CHRDL1Q9BU40 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms