Protein–RNA interactions for Protein: Q99674

CGREF1, Cell growth regulator with EF hand domain protein 1, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1Q99674 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
CGREF1Q99674 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CGREF1Q99674 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CGREF1Q99674 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CGREF1Q99674 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CGREF1Q99674 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.58■□□□□ 0.08
CGREF1Q99674 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.58■□□□□ 0.08
CGREF1Q99674 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CGREF1Q99674 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CGREF1Q99674 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC15.58■□□□□ 0.08
CGREF1Q99674 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC15.58■□□□□ 0.08
CGREF1Q99674 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC15.58■□□□□ 0.08
CGREF1Q99674 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.58■□□□□ 0.08
CGREF1Q99674 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.58■□□□□ 0.08
CGREF1Q99674 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CGREF1Q99674 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CGREF1Q99674 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CGREF1Q99674 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
CGREF1Q99674 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CGREF1Q99674 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.58■□□□□ 0.08
CGREF1Q99674 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
CGREF1Q99674 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CGREF1Q99674 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
CGREF1Q99674 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CGREF1Q99674 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CGREF1Q99674 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CGREF1Q99674 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.57■□□□□ 0.08
CGREF1Q99674 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CGREF1Q99674 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CGREF1Q99674 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CGREF1Q99674 PPT1-215ENST00000641471 2368 ntBASIC15.57■□□□□ 0.08
CGREF1Q99674 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.57■□□□□ 0.08
CGREF1Q99674 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CGREF1Q99674 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
CGREF1Q99674 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CGREF1Q99674 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CGREF1Q99674 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.57■□□□□ 0.08
CGREF1Q99674 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CGREF1Q99674 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.57■□□□□ 0.08
CGREF1Q99674 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CGREF1Q99674 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.57■□□□□ 0.08
CGREF1Q99674 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.57■□□□□ 0.08
CGREF1Q99674 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CGREF1Q99674 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.57■□□□□ 0.08
CGREF1Q99674 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.57■□□□□ 0.08
CGREF1Q99674 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.57■□□□□ 0.08
CGREF1Q99674 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.57■□□□□ 0.08
CGREF1Q99674 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC15.57■□□□□ 0.08
CGREF1Q99674 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CGREF1Q99674 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC15.57■□□□□ 0.08
CGREF1Q99674 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.57■□□□□ 0.08
CGREF1Q99674 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.57■□□□□ 0.08
CGREF1Q99674 AC006557.2-201ENST00000592985 1240 ntBASIC15.57■□□□□ 0.08
CGREF1Q99674 AC008608.2-201ENST00000606089 416 ntBASIC15.57■□□□□ 0.08
CGREF1Q99674 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.57■□□□□ 0.08
CGREF1Q99674 GGTLC5P-201ENST00000617623 998 ntBASIC15.57■□□□□ 0.08
CGREF1Q99674 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC15.57■□□□□ 0.08
CGREF1Q99674 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.57■□□□□ 0.08
CGREF1Q99674 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CGREF1Q99674 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.57■□□□□ 0.08
CGREF1Q99674 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.57■□□□□ 0.08
CGREF1Q99674 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CGREF1Q99674 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.57■□□□□ 0.08
CGREF1Q99674 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CGREF1Q99674 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.57■□□□□ 0.08
CGREF1Q99674 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.57■□□□□ 0.08
CGREF1Q99674 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CGREF1Q99674 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CGREF1Q99674 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CGREF1Q99674 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CGREF1Q99674 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.57■□□□□ 0.08
CGREF1Q99674 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.56■□□□□ 0.08
CGREF1Q99674 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.56■□□□□ 0.08
CGREF1Q99674 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CGREF1Q99674 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.56■□□□□ 0.08
CGREF1Q99674 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
CGREF1Q99674 CICP4-201ENST00000447359 2812 ntBASIC15.56■□□□□ 0.08
CGREF1Q99674 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CGREF1Q99674 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CGREF1Q99674 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CGREF1Q99674 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CGREF1Q99674 LAGE3P1-201ENST00000425356 484 ntBASIC15.56■□□□□ 0.08
CGREF1Q99674 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.56■□□□□ 0.08
CGREF1Q99674 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.56■□□□□ 0.08
CGREF1Q99674 AC025062.2-201ENST00000605477 670 ntBASIC15.56■□□□□ 0.08
CGREF1Q99674 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.56■□□□□ 0.08
CGREF1Q99674 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CGREF1Q99674 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CGREF1Q99674 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CGREF1Q99674 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CGREF1Q99674 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
CGREF1Q99674 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.56■□□□□ 0.08
CGREF1Q99674 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.56■□□□□ 0.08
CGREF1Q99674 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC15.56■□□□□ 0.08
CGREF1Q99674 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CGREF1Q99674 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CGREF1Q99674 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.56■□□□□ 0.08
CGREF1Q99674 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CGREF1Q99674 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CGREF1Q99674 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms