Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
MUC4Q99102 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
MUC4Q99102 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
MUC4Q99102 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC11.98□□□□□ -0.49
MUC4Q99102 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
MUC4Q99102 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
MUC4Q99102 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
MUC4Q99102 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC11.98□□□□□ -0.49
MUC4Q99102 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC11.98□□□□□ -0.49
MUC4Q99102 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC11.98□□□□□ -0.49
MUC4Q99102 HCG4B-203ENST00000450128 991 ntBASIC11.98□□□□□ -0.49
MUC4Q99102 CYMP-203ENST00000474680 1263 ntBASIC11.98□□□□□ -0.49
MUC4Q99102 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC11.98□□□□□ -0.49
MUC4Q99102 CYB561-216ENST00000582297 897 ntTSL 3 BASIC11.98□□□□□ -0.49
MUC4Q99102 PRKN-208ENST00000610470 531 ntTSL 2 BASIC11.98□□□□□ -0.49
MUC4Q99102 PRKN-209ENST00000612485 225 ntTSL 5 BASIC11.98□□□□□ -0.49
MUC4Q99102 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC11.98□□□□□ -0.49
MUC4Q99102 PGM5P2-202ENST00000637225 1043 ntBASIC11.98□□□□□ -0.49
MUC4Q99102 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
MUC4Q99102 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC11.97□□□□□ -0.49
MUC4Q99102 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
MUC4Q99102 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
MUC4Q99102 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
MUC4Q99102 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC11.97□□□□□ -0.49
MUC4Q99102 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
MUC4Q99102 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC11.97□□□□□ -0.49
MUC4Q99102 LINC02447-202ENST00000501888 2146 ntBASIC11.97□□□□□ -0.49
MUC4Q99102 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
MUC4Q99102 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
MUC4Q99102 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
MUC4Q99102 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
MUC4Q99102 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
MUC4Q99102 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC11.97□□□□□ -0.49
MUC4Q99102 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
MUC4Q99102 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
MUC4Q99102 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
MUC4Q99102 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
MUC4Q99102 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
MUC4Q99102 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
MUC4Q99102 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
MUC4Q99102 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
MUC4Q99102 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
MUC4Q99102 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
MUC4Q99102 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
MUC4Q99102 STARD13-205ENST00000439831 945 ntTSL 2 BASIC11.97□□□□□ -0.49
MUC4Q99102 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC11.97□□□□□ -0.49
MUC4Q99102 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC11.97□□□□□ -0.49
MUC4Q99102 RPS15P9-201ENST00000494093 319 ntBASIC11.97□□□□□ -0.49
MUC4Q99102 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
MUC4Q99102 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC11.97□□□□□ -0.49
MUC4Q99102 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
MUC4Q99102 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
MUC4Q99102 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
MUC4Q99102 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
MUC4Q99102 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
MUC4Q99102 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
MUC4Q99102 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
MUC4Q99102 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC11.97□□□□□ -0.49
MUC4Q99102 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
MUC4Q99102 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC11.97□□□□□ -0.49
MUC4Q99102 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
MUC4Q99102 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
MUC4Q99102 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
MUC4Q99102 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
MUC4Q99102 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
MUC4Q99102 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
MUC4Q99102 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
MUC4Q99102 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
MUC4Q99102 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
MUC4Q99102 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
MUC4Q99102 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
MUC4Q99102 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
MUC4Q99102 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
MUC4Q99102 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
MUC4Q99102 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC11.96□□□□□ -0.49
MUC4Q99102 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
MUC4Q99102 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
MUC4Q99102 CSF3-203ENST00000394148 622 ntTSL 3 BASIC11.96□□□□□ -0.49
MUC4Q99102 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC11.96□□□□□ -0.49
MUC4Q99102 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC11.96□□□□□ -0.49
MUC4Q99102 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC11.96□□□□□ -0.49
MUC4Q99102 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC11.96□□□□□ -0.49
MUC4Q99102 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
MUC4Q99102 ORC5-208ENST00000626700 344 ntTSL 3 BASIC11.96□□□□□ -0.49
MUC4Q99102 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC11.96□□□□□ -0.49
MUC4Q99102 ZNF259P1-201ENST00000407656 1365 ntBASIC11.96□□□□□ -0.49
MUC4Q99102 TOP3BP1-201ENST00000420768 1380 ntBASIC11.96□□□□□ -0.49
MUC4Q99102 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
MUC4Q99102 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
MUC4Q99102 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
MUC4Q99102 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC11.96□□□□□ -0.49
MUC4Q99102 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
MUC4Q99102 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
MUC4Q99102 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
MUC4Q99102 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
MUC4Q99102 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
MUC4Q99102 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
MUC4Q99102 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
MUC4Q99102 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC11.96□□□□□ -0.49
MUC4Q99102 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms