Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
AP1S3Q96PC3 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC12.44□□□□□ -0.42
AP1S3Q96PC3 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC12.44□□□□□ -0.42
AP1S3Q96PC3 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC12.44□□□□□ -0.42
AP1S3Q96PC3 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
AP1S3Q96PC3 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
AP1S3Q96PC3 MAP3K9-205ENST00000554752 11169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
AP1S3Q96PC3 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
AP1S3Q96PC3 HLA-A-202ENST00000376806 1854 ntBASIC12.44□□□□□ -0.42
AP1S3Q96PC3 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
AP1S3Q96PC3 CICP14-201ENST00000629111 2732 ntBASIC12.44□□□□□ -0.42
AP1S3Q96PC3 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
AP1S3Q96PC3 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC12.44□□□□□ -0.42
AP1S3Q96PC3 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
AP1S3Q96PC3 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
AP1S3Q96PC3 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
AP1S3Q96PC3 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
AP1S3Q96PC3 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
AP1S3Q96PC3 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
AP1S3Q96PC3 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
AP1S3Q96PC3 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
AP1S3Q96PC3 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
AP1S3Q96PC3 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
AP1S3Q96PC3 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
AP1S3Q96PC3 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
AP1S3Q96PC3 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC12.43□□□□□ -0.42
AP1S3Q96PC3 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
AP1S3Q96PC3 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
AP1S3Q96PC3 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
AP1S3Q96PC3 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
AP1S3Q96PC3 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
AP1S3Q96PC3 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
AP1S3Q96PC3 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
AP1S3Q96PC3 FRMD8P1-201ENST00000440433 1524 ntBASIC12.43□□□□□ -0.42
AP1S3Q96PC3 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
AP1S3Q96PC3 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
AP1S3Q96PC3 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
AP1S3Q96PC3 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
AP1S3Q96PC3 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC12.43□□□□□ -0.42
AP1S3Q96PC3 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
AP1S3Q96PC3 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
AP1S3Q96PC3 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
AP1S3Q96PC3 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
AP1S3Q96PC3 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
AP1S3Q96PC3 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
AP1S3Q96PC3 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
AP1S3Q96PC3 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
AP1S3Q96PC3 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
AP1S3Q96PC3 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
AP1S3Q96PC3 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
AP1S3Q96PC3 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
AP1S3Q96PC3 FAM220CP-201ENST00000395253 831 ntBASIC12.43□□□□□ -0.42
AP1S3Q96PC3 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC12.43□□□□□ -0.42
AP1S3Q96PC3 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC12.43□□□□□ -0.42
AP1S3Q96PC3 AC145285.6-201ENST00000604632 637 ntBASIC12.43□□□□□ -0.42
AP1S3Q96PC3 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
AP1S3Q96PC3 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
AP1S3Q96PC3 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
AP1S3Q96PC3 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
AP1S3Q96PC3 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
AP1S3Q96PC3 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC12.43□□□□□ -0.42
AP1S3Q96PC3 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
AP1S3Q96PC3 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
AP1S3Q96PC3 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
AP1S3Q96PC3 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC12.43□□□□□ -0.42
AP1S3Q96PC3 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
AP1S3Q96PC3 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
AP1S3Q96PC3 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC12.43□□□□□ -0.42
AP1S3Q96PC3 HDLBP-214ENST00000427183 6238 ntTSL 2 BASIC12.43□□□□□ -0.42
AP1S3Q96PC3 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC12.43□□□□□ -0.42
AP1S3Q96PC3 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC12.43□□□□□ -0.42
AP1S3Q96PC3 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
AP1S3Q96PC3 GPR161-209ENST00000539777 7655 ntTSL 2 BASIC12.43□□□□□ -0.42
AP1S3Q96PC3 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
AP1S3Q96PC3 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
AP1S3Q96PC3 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
AP1S3Q96PC3 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
AP1S3Q96PC3 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
AP1S3Q96PC3 MTMR3-201ENST00000323630 5866 ntTSL 5 BASIC12.42□□□□□ -0.42
AP1S3Q96PC3 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC12.42□□□□□ -0.42
AP1S3Q96PC3 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
AP1S3Q96PC3 FUT8-AS1-201ENST00000621019 1521 ntBASIC12.42□□□□□ -0.42
AP1S3Q96PC3 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
AP1S3Q96PC3 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
AP1S3Q96PC3 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC12.42□□□□□ -0.42
AP1S3Q96PC3 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
AP1S3Q96PC3 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
AP1S3Q96PC3 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
AP1S3Q96PC3 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
AP1S3Q96PC3 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
AP1S3Q96PC3 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
AP1S3Q96PC3 Z83836.1-201ENST00000624605 1642 ntBASIC12.42□□□□□ -0.42
AP1S3Q96PC3 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
AP1S3Q96PC3 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
AP1S3Q96PC3 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
AP1S3Q96PC3 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
AP1S3Q96PC3 COPE-203ENST00000351079 907 ntTSL 2 BASIC12.42□□□□□ -0.42
AP1S3Q96PC3 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
AP1S3Q96PC3 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
AP1S3Q96PC3 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms