Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.98■□□□□ 0.63
CHAMP1Q96JM3 MIR3652-201ENST00000579335 131 ntBASIC18.98■□□□□ 0.63
CHAMP1Q96JM3 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CHAMP1Q96JM3 AC107918.4-202ENST00000641623 219 ntBASIC18.98■□□□□ 0.63
CHAMP1Q96JM3 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHAMP1Q96JM3 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHAMP1Q96JM3 RELA-227ENST00000615805 2236 ntTSL 5 BASIC18.98■□□□□ 0.63
CHAMP1Q96JM3 AC091951.1-201ENST00000512854 2465 ntBASIC18.98■□□□□ 0.63
CHAMP1Q96JM3 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHAMP1Q96JM3 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHAMP1Q96JM3 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHAMP1Q96JM3 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CHAMP1Q96JM3 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHAMP1Q96JM3 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHAMP1Q96JM3 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CHAMP1Q96JM3 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CHAMP1Q96JM3 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.98■□□□□ 0.63
CHAMP1Q96JM3 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHAMP1Q96JM3 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHAMP1Q96JM3 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CHAMP1Q96JM3 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHAMP1Q96JM3 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC18.97■□□□□ 0.63
CHAMP1Q96JM3 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHAMP1Q96JM3 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CHAMP1Q96JM3 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC18.97■□□□□ 0.63
CHAMP1Q96JM3 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHAMP1Q96JM3 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC18.97■□□□□ 0.63
CHAMP1Q96JM3 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CHAMP1Q96JM3 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CHAMP1Q96JM3 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHAMP1Q96JM3 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHAMP1Q96JM3 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.97■□□□□ 0.63
CHAMP1Q96JM3 FAAHP1-202ENST00000446499 1238 ntBASIC18.97■□□□□ 0.63
CHAMP1Q96JM3 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHAMP1Q96JM3 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.97■□□□□ 0.63
CHAMP1Q96JM3 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.97■□□□□ 0.63
CHAMP1Q96JM3 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.97■□□□□ 0.63
CHAMP1Q96JM3 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.97■□□□□ 0.63
CHAMP1Q96JM3 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHAMP1Q96JM3 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.97■□□□□ 0.63
CHAMP1Q96JM3 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC18.97■□□□□ 0.63
CHAMP1Q96JM3 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CHAMP1Q96JM3 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC18.97■□□□□ 0.63
CHAMP1Q96JM3 GGTLC5P-201ENST00000617623 998 ntBASIC18.97■□□□□ 0.63
CHAMP1Q96JM3 MST1L-201ENST00000442552 2185 ntBASIC18.97■□□□□ 0.63
CHAMP1Q96JM3 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CHAMP1Q96JM3 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CHAMP1Q96JM3 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC18.97■□□□□ 0.63
CHAMP1Q96JM3 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHAMP1Q96JM3 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC18.97■□□□□ 0.63
CHAMP1Q96JM3 SNX18-202ENST00000343017 3140 ntBASIC18.97■□□□□ 0.63
CHAMP1Q96JM3 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHAMP1Q96JM3 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHAMP1Q96JM3 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.97■□□□□ 0.63
CHAMP1Q96JM3 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHAMP1Q96JM3 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.97■□□□□ 0.63
CHAMP1Q96JM3 AP002414.3-201ENST00000589352 1468 ntBASIC18.97■□□□□ 0.63
CHAMP1Q96JM3 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.96■□□□□ 0.63
CHAMP1Q96JM3 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHAMP1Q96JM3 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHAMP1Q96JM3 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC18.96■□□□□ 0.63
CHAMP1Q96JM3 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CHAMP1Q96JM3 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC18.96■□□□□ 0.63
CHAMP1Q96JM3 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC18.96■□□□□ 0.63
CHAMP1Q96JM3 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CHAMP1Q96JM3 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHAMP1Q96JM3 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHAMP1Q96JM3 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
CHAMP1Q96JM3 BID-213ENST00000615414 2236 ntTSL 5 BASIC18.96■□□□□ 0.63
CHAMP1Q96JM3 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHAMP1Q96JM3 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHAMP1Q96JM3 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHAMP1Q96JM3 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.96■□□□□ 0.63
CHAMP1Q96JM3 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHAMP1Q96JM3 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.96■□□□□ 0.63
CHAMP1Q96JM3 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
CHAMP1Q96JM3 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.96■□□□□ 0.63
CHAMP1Q96JM3 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.96■□□□□ 0.63
CHAMP1Q96JM3 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.96■□□□□ 0.63
CHAMP1Q96JM3 TP73-AS1-207ENST00000624167 988 ntBASIC18.96■□□□□ 0.63
CHAMP1Q96JM3 AC008677.1-201ENST00000519230 1561 ntBASIC18.96■□□□□ 0.63
CHAMP1Q96JM3 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
CHAMP1Q96JM3 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CHAMP1Q96JM3 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHAMP1Q96JM3 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CHAMP1Q96JM3 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC18.96■□□□□ 0.63
CHAMP1Q96JM3 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHAMP1Q96JM3 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC18.96■□□□□ 0.63
CHAMP1Q96JM3 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC18.96■□□□□ 0.63
CHAMP1Q96JM3 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC18.96■□□□□ 0.63
CHAMP1Q96JM3 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHAMP1Q96JM3 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHAMP1Q96JM3 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
CHAMP1Q96JM3 AC009090.5-201ENST00000624886 2285 ntBASIC18.95■□□□□ 0.62
CHAMP1Q96JM3 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHAMP1Q96JM3 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CHAMP1Q96JM3 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHAMP1Q96JM3 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHAMP1Q96JM3 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC18.95■□□□□ 0.62
CHAMP1Q96JM3 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms