Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.3■□□□□ 0.36
TRIM11Q96F44 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TRIM11Q96F44 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
TRIM11Q96F44 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM11Q96F44 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.3■□□□□ 0.36
TRIM11Q96F44 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.3■□□□□ 0.36
TRIM11Q96F44 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM11Q96F44 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
TRIM11Q96F44 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TRIM11Q96F44 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM11Q96F44 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.3■□□□□ 0.36
TRIM11Q96F44 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM11Q96F44 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM11Q96F44 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.3■□□□□ 0.36
TRIM11Q96F44 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.3■□□□□ 0.36
TRIM11Q96F44 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM11Q96F44 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.3■□□□□ 0.36
TRIM11Q96F44 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.3■□□□□ 0.36
TRIM11Q96F44 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.3■□□□□ 0.36
TRIM11Q96F44 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.3■□□□□ 0.36
TRIM11Q96F44 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.3■□□□□ 0.36
TRIM11Q96F44 AC008741.2-201ENST00000612792 3115 ntBASIC17.3■□□□□ 0.36
TRIM11Q96F44 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM11Q96F44 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM11Q96F44 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM11Q96F44 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM11Q96F44 AC112504.1-201ENST00000623415 1841 ntBASIC17.3■□□□□ 0.36
TRIM11Q96F44 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TRIM11Q96F44 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
TRIM11Q96F44 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
TRIM11Q96F44 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM11Q96F44 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM11Q96F44 WASH6P-202ENST00000359512 1437 ntBASIC17.3■□□□□ 0.36
TRIM11Q96F44 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.3■□□□□ 0.36
TRIM11Q96F44 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM11Q96F44 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
TRIM11Q96F44 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM11Q96F44 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.29■□□□□ 0.36
TRIM11Q96F44 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.29■□□□□ 0.36
TRIM11Q96F44 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM11Q96F44 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.29■□□□□ 0.36
TRIM11Q96F44 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM11Q96F44 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM11Q96F44 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.29■□□□□ 0.36
TRIM11Q96F44 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.29■□□□□ 0.36
TRIM11Q96F44 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.29■□□□□ 0.36
TRIM11Q96F44 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM11Q96F44 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.29■□□□□ 0.36
TRIM11Q96F44 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.29■□□□□ 0.36
TRIM11Q96F44 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.29■□□□□ 0.36
TRIM11Q96F44 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TRIM11Q96F44 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM11Q96F44 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
TRIM11Q96F44 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.29■□□□□ 0.36
TRIM11Q96F44 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.29■□□□□ 0.36
TRIM11Q96F44 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.29■□□□□ 0.36
TRIM11Q96F44 RPL13AP23-201ENST00000480739 586 ntBASIC17.29■□□□□ 0.36
TRIM11Q96F44 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
TRIM11Q96F44 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.29■□□□□ 0.36
TRIM11Q96F44 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.29■□□□□ 0.36
TRIM11Q96F44 AC068137.2-201ENST00000605408 478 ntBASIC17.29■□□□□ 0.36
TRIM11Q96F44 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM11Q96F44 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM11Q96F44 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TRIM11Q96F44 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM11Q96F44 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.29■□□□□ 0.36
TRIM11Q96F44 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM11Q96F44 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TRIM11Q96F44 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC17.29■□□□□ 0.36
TRIM11Q96F44 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
TRIM11Q96F44 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.29■□□□□ 0.36
TRIM11Q96F44 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM11Q96F44 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM11Q96F44 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.29■□□□□ 0.36
TRIM11Q96F44 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM11Q96F44 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM11Q96F44 ZNF259P1-201ENST00000407656 1365 ntBASIC17.28■□□□□ 0.36
TRIM11Q96F44 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
TRIM11Q96F44 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
TRIM11Q96F44 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TRIM11Q96F44 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.28■□□□□ 0.36
TRIM11Q96F44 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
TRIM11Q96F44 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM11Q96F44 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.28■□□□□ 0.36
TRIM11Q96F44 AC010491.1-201ENST00000563101 2797 ntBASIC17.28■□□□□ 0.36
TRIM11Q96F44 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM11Q96F44 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
TRIM11Q96F44 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM11Q96F44 AC002056.1-201ENST00000395613 760 ntBASIC17.28■□□□□ 0.36
TRIM11Q96F44 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.28■□□□□ 0.36
TRIM11Q96F44 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
TRIM11Q96F44 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
TRIM11Q96F44 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
TRIM11Q96F44 PDPK2P-202ENST00000562415 1191 ntBASIC17.28■□□□□ 0.36
TRIM11Q96F44 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.28■□□□□ 0.36
TRIM11Q96F44 AC018845.2-201ENST00000568326 409 ntBASIC17.28■□□□□ 0.36
TRIM11Q96F44 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.28■□□□□ 0.36
TRIM11Q96F44 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.28■□□□□ 0.36
TRIM11Q96F44 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.28■□□□□ 0.36
TRIM11Q96F44 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms