Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF31Q96EP0 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC15.82■□□□□ 0.12
RNF31Q96EP0 AC091167.2-201ENST00000579581 588 ntBASIC15.82■□□□□ 0.12
RNF31Q96EP0 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC15.82■□□□□ 0.12
RNF31Q96EP0 AP001059.3-201ENST00000619053 235 ntBASIC15.82■□□□□ 0.12
RNF31Q96EP0 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RNF31Q96EP0 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF31Q96EP0 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
RNF31Q96EP0 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF31Q96EP0 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.82■□□□□ 0.12
RNF31Q96EP0 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF31Q96EP0 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
RNF31Q96EP0 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF31Q96EP0 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.82■□□□□ 0.12
RNF31Q96EP0 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.82■□□□□ 0.12
RNF31Q96EP0 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.82■□□□□ 0.12
RNF31Q96EP0 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
RNF31Q96EP0 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF31Q96EP0 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF31Q96EP0 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF31Q96EP0 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF31Q96EP0 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF31Q96EP0 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RNF31Q96EP0 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF31Q96EP0 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RNF31Q96EP0 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF31Q96EP0 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RNF31Q96EP0 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC15.81■□□□□ 0.12
RNF31Q96EP0 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.81■□□□□ 0.12
RNF31Q96EP0 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RNF31Q96EP0 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF31Q96EP0 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RNF31Q96EP0 AGGF1P2-201ENST00000426656 2106 ntBASIC15.81■□□□□ 0.12
RNF31Q96EP0 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC15.81■□□□□ 0.12
RNF31Q96EP0 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15.81■□□□□ 0.12
RNF31Q96EP0 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.81■□□□□ 0.12
RNF31Q96EP0 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF31Q96EP0 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.81■□□□□ 0.12
RNF31Q96EP0 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF31Q96EP0 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.81■□□□□ 0.12
RNF31Q96EP0 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.81■□□□□ 0.12
RNF31Q96EP0 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RNF31Q96EP0 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.81■□□□□ 0.12
RNF31Q96EP0 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.81■□□□□ 0.12
RNF31Q96EP0 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC15.81■□□□□ 0.12
RNF31Q96EP0 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.81■□□□□ 0.12
RNF31Q96EP0 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC15.81■□□□□ 0.12
RNF31Q96EP0 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF31Q96EP0 AC003101.2-201ENST00000612557 442 ntBASIC15.81■□□□□ 0.12
RNF31Q96EP0 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
RNF31Q96EP0 AL021920.2-201ENST00000624828 1351 ntBASIC15.81■□□□□ 0.12
RNF31Q96EP0 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.81■□□□□ 0.12
RNF31Q96EP0 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF31Q96EP0 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
RNF31Q96EP0 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.81■□□□□ 0.12
RNF31Q96EP0 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RNF31Q96EP0 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF31Q96EP0 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF31Q96EP0 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.81■□□□□ 0.12
RNF31Q96EP0 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF31Q96EP0 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RNF31Q96EP0 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF31Q96EP0 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.8■□□□□ 0.12
RNF31Q96EP0 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.8■□□□□ 0.12
RNF31Q96EP0 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
RNF31Q96EP0 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF31Q96EP0 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.8■□□□□ 0.12
RNF31Q96EP0 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF31Q96EP0 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.8■□□□□ 0.12
RNF31Q96EP0 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
RNF31Q96EP0 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
RNF31Q96EP0 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.8■□□□□ 0.12
RNF31Q96EP0 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.8■□□□□ 0.12
RNF31Q96EP0 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF31Q96EP0 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RNF31Q96EP0 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF31Q96EP0 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RNF31Q96EP0 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RNF31Q96EP0 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.8■□□□□ 0.12
RNF31Q96EP0 RAC2-204ENST00000406508 893 ntTSL 5 BASIC15.8■□□□□ 0.12
RNF31Q96EP0 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RNF31Q96EP0 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC15.8■□□□□ 0.12
RNF31Q96EP0 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15.8■□□□□ 0.12
RNF31Q96EP0 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC15.8■□□□□ 0.12
RNF31Q96EP0 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
RNF31Q96EP0 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.8■□□□□ 0.12
RNF31Q96EP0 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
RNF31Q96EP0 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC15.8■□□□□ 0.12
RNF31Q96EP0 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.8■□□□□ 0.12
RNF31Q96EP0 AC109635.5-201ENST00000533593 962 ntBASIC15.8■□□□□ 0.12
RNF31Q96EP0 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC15.8■□□□□ 0.12
RNF31Q96EP0 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.8■□□□□ 0.12
RNF31Q96EP0 MIR4492-201ENST00000581627 80 ntBASIC15.8■□□□□ 0.12
RNF31Q96EP0 AP001350.2-201ENST00000625104 1094 ntBASIC15.8■□□□□ 0.12
RNF31Q96EP0 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RNF31Q96EP0 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RNF31Q96EP0 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RNF31Q96EP0 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF31Q96EP0 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF31Q96EP0 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms