Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM54Q969K7 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.37□□□□□ -0.11
TMEM54Q969K7 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM54Q969K7 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM54Q969K7 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM54Q969K7 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM54Q969K7 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.37□□□□□ -0.11
TMEM54Q969K7 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.37□□□□□ -0.11
TMEM54Q969K7 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM54Q969K7 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM54Q969K7 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.37□□□□□ -0.11
TMEM54Q969K7 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM54Q969K7 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM54Q969K7 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM54Q969K7 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM54Q969K7 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.36□□□□□ -0.11
TMEM54Q969K7 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM54Q969K7 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.36□□□□□ -0.11
TMEM54Q969K7 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM54Q969K7 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM54Q969K7 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM54Q969K7 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.36□□□□□ -0.11
TMEM54Q969K7 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
TMEM54Q969K7 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
TMEM54Q969K7 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM54Q969K7 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM54Q969K7 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM54Q969K7 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.36□□□□□ -0.11
TMEM54Q969K7 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC14.36□□□□□ -0.11
TMEM54Q969K7 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM54Q969K7 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM54Q969K7 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
TMEM54Q969K7 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM54Q969K7 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
TMEM54Q969K7 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.36□□□□□ -0.11
TMEM54Q969K7 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM54Q969K7 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM54Q969K7 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM54Q969K7 RPP21-221ENST00000428040 594 ntTSL 2 BASIC14.36□□□□□ -0.11
TMEM54Q969K7 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM54Q969K7 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.36□□□□□ -0.11
TMEM54Q969K7 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM54Q969K7 DHDH-204ENST00000523250 634 ntTSL 5 BASIC14.36□□□□□ -0.11
TMEM54Q969K7 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.36□□□□□ -0.11
TMEM54Q969K7 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM54Q969K7 SLC25A39P2-201ENST00000537614 270 ntBASIC14.36□□□□□ -0.11
TMEM54Q969K7 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.36□□□□□ -0.11
TMEM54Q969K7 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.36□□□□□ -0.11
TMEM54Q969K7 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.36□□□□□ -0.11
TMEM54Q969K7 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14.36□□□□□ -0.11
TMEM54Q969K7 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.36□□□□□ -0.11
TMEM54Q969K7 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.36□□□□□ -0.11
TMEM54Q969K7 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM54Q969K7 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
TMEM54Q969K7 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC14.36□□□□□ -0.11
TMEM54Q969K7 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM54Q969K7 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
TMEM54Q969K7 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM54Q969K7 LINC02447-202ENST00000501888 2146 ntBASIC14.36□□□□□ -0.11
TMEM54Q969K7 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM54Q969K7 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM54Q969K7 AC112504.1-201ENST00000623415 1841 ntBASIC14.36□□□□□ -0.11
TMEM54Q969K7 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC14.36□□□□□ -0.11
TMEM54Q969K7 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.36□□□□□ -0.11
TMEM54Q969K7 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM54Q969K7 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.35□□□□□ -0.11
TMEM54Q969K7 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM54Q969K7 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM54Q969K7 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM54Q969K7 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM54Q969K7 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
TMEM54Q969K7 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
TMEM54Q969K7 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM54Q969K7 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM54Q969K7 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM54Q969K7 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM54Q969K7 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
TMEM54Q969K7 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
TMEM54Q969K7 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM54Q969K7 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.35□□□□□ -0.11
TMEM54Q969K7 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
TMEM54Q969K7 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
TMEM54Q969K7 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM54Q969K7 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
TMEM54Q969K7 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM54Q969K7 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM54Q969K7 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.35□□□□□ -0.11
TMEM54Q969K7 HLA-H-201ENST00000383620 1096 ntBASIC14.35□□□□□ -0.11
TMEM54Q969K7 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.35□□□□□ -0.11
TMEM54Q969K7 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC14.35□□□□□ -0.11
TMEM54Q969K7 AC004461.1-201ENST00000412461 403 ntBASIC14.35□□□□□ -0.11
TMEM54Q969K7 AC005237.2-201ENST00000434368 219 ntBASIC14.35□□□□□ -0.11
TMEM54Q969K7 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC14.35□□□□□ -0.11
TMEM54Q969K7 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC14.35□□□□□ -0.11
TMEM54Q969K7 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC14.35□□□□□ -0.11
TMEM54Q969K7 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.35□□□□□ -0.11
TMEM54Q969K7 AP000344.2-201ENST00000512987 629 ntBASIC14.35□□□□□ -0.11
TMEM54Q969K7 RNA5SP410-201ENST00000516285 106 ntBASIC14.35□□□□□ -0.11
TMEM54Q969K7 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC14.35□□□□□ -0.11
TMEM54Q969K7 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms