Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 RNF10-203ENST00000413266 2671 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
SVIPQ8NHG7 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SVIPQ8NHG7 WDR70-201ENST00000265107 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SVIPQ8NHG7 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SVIPQ8NHG7 TP73-203ENST00000357733 4899 ntTSL 5 BASIC10.03□□□□□ -0.8
SVIPQ8NHG7 LINC02267-201ENST00000513393 1687 ntTSL 3 BASIC10.03□□□□□ -0.8
SVIPQ8NHG7 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC10.03□□□□□ -0.8
SVIPQ8NHG7 IL5RA-203ENST00000383846 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
SVIPQ8NHG7 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
SVIPQ8NHG7 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SVIPQ8NHG7 AC098864.1-202ENST00000507869 2129 ntTSL 2 BASIC10.03□□□□□ -0.8
SVIPQ8NHG7 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
SVIPQ8NHG7 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
SVIPQ8NHG7 C1orf94-202ENST00000488417 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SVIPQ8NHG7 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC10.03□□□□□ -0.8
SVIPQ8NHG7 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SVIPQ8NHG7 AC099489.1-203ENST00000598234 10568 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
SVIPQ8NHG7 RAB43-204ENST00000393307 4203 ntAPPRIS P1 TSL 4 BASIC10.03□□□□□ -0.8
SVIPQ8NHG7 ERBB2-201ENST00000269571 4545 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SVIPQ8NHG7 FBN3-201ENST00000270509 9232 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SVIPQ8NHG7 SNX33-201ENST00000308527 8008 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SVIPQ8NHG7 JUP-201ENST00000310706 3200 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SVIPQ8NHG7 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
SVIPQ8NHG7 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SVIPQ8NHG7 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SVIPQ8NHG7 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SVIPQ8NHG7 CABLES1-203ENST00000420687 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
SVIPQ8NHG7 PEX5L-209ENST00000468741 2309 ntAPPRIS ALT2 TSL 2 BASIC10.03□□□□□ -0.8
SVIPQ8NHG7 GPRC5D-AS1-202ENST00000499948 1746 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SVIPQ8NHG7 AC084866.2-201ENST00000509956 449 ntTSL 2 BASIC10.03□□□□□ -0.8
SVIPQ8NHG7 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC10.03□□□□□ -0.8
SVIPQ8NHG7 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC10.03□□□□□ -0.8
SVIPQ8NHG7 AP001271.2-201ENST00000624018 1556 ntBASIC10.03□□□□□ -0.8
SVIPQ8NHG7 OR8D4-202ENST00000641687 2904 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
SVIPQ8NHG7 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC10.03□□□□□ -0.8
SVIPQ8NHG7 NDST1-207ENST00000523767 3449 ntTSL 2 BASIC10.03□□□□□ -0.8
SVIPQ8NHG7 UBE2I-202ENST00000355803 3253 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
SVIPQ8NHG7 GTSE1-201ENST00000454366 3112 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SVIPQ8NHG7 AC099343.3-201ENST00000605834 2503 ntBASIC10.03□□□□□ -0.8
SVIPQ8NHG7 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC10.03□□□□□ -0.8
SVIPQ8NHG7 TCF4-236ENST00000567880 1948 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SVIPQ8NHG7 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC10.03□□□□□ -0.8
SVIPQ8NHG7 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
SVIPQ8NHG7 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
SVIPQ8NHG7 LINC00910-202ENST00000586231 2890 ntTSL 2 BASIC10.03□□□□□ -0.8
SVIPQ8NHG7 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SVIPQ8NHG7 IVD-203ENST00000479013 4251 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SVIPQ8NHG7 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SVIPQ8NHG7 PAX6-282ENST00000640975 2553 ntAPPRIS P4 TSL 1 (best) BASIC10.03□□□□□ -0.8
SVIPQ8NHG7 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC10.03□□□□□ -0.8
SVIPQ8NHG7 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SVIPQ8NHG7 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
SVIPQ8NHG7 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC10.03□□□□□ -0.8
SVIPQ8NHG7 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC10.03□□□□□ -0.8
SVIPQ8NHG7 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC10.03□□□□□ -0.8
SVIPQ8NHG7 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC10.03□□□□□ -0.8
SVIPQ8NHG7 LRPAP1-202ENST00000500728 7819 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SVIPQ8NHG7 NDP-201ENST00000378062 1833 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SVIPQ8NHG7 CSF2RA-206ENST00000381529 1816 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
SVIPQ8NHG7 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
SVIPQ8NHG7 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SVIPQ8NHG7 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SVIPQ8NHG7 LINC01544-201ENST00000567801 5168 ntTSL 2 BASIC10.03□□□□□ -0.8
SVIPQ8NHG7 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
SVIPQ8NHG7 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
SVIPQ8NHG7 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
SVIPQ8NHG7 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
SVIPQ8NHG7 TUBD1-201ENST00000325752 2490 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.8
SVIPQ8NHG7 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
SVIPQ8NHG7 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
SVIPQ8NHG7 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC10.02□□□□□ -0.8
SVIPQ8NHG7 FBLN2-201ENST00000295760 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
SVIPQ8NHG7 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC10.02□□□□□ -0.8
SVIPQ8NHG7 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC10.02□□□□□ -0.8
SVIPQ8NHG7 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
SVIPQ8NHG7 TBX22-202ENST00000373296 2355 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.8
SVIPQ8NHG7 CORO7-202ENST00000537233 3392 ntTSL 2 BASIC10.02□□□□□ -0.81
SVIPQ8NHG7 AC061975.6-201ENST00000579045 1553 ntBASIC10.02□□□□□ -0.81
SVIPQ8NHG7 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
SVIPQ8NHG7 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
SVIPQ8NHG7 SEPT10-202ENST00000397712 3071 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
SVIPQ8NHG7 ABCA2-202ENST00000341511 8063 ntAPPRIS P2 TSL 5 BASIC10.02□□□□□ -0.81
SVIPQ8NHG7 NET1-201ENST00000355029 3402 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
SVIPQ8NHG7 PARP10-205ENST00000525773 3404 ntAPPRIS ALT2 TSL 2 BASIC10.02□□□□□ -0.81
SVIPQ8NHG7 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
SVIPQ8NHG7 CELF5-203ENST00000541430 4268 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
SVIPQ8NHG7 PRKCQ-201ENST00000263125 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
SVIPQ8NHG7 FDXACB1-201ENST00000260257 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
SVIPQ8NHG7 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
SVIPQ8NHG7 PAX6-243ENST00000638903 2620 ntAPPRIS P4 TSL 1 (best) BASIC10.02□□□□□ -0.81
SVIPQ8NHG7 AC048382.1-201ENST00000542197 1018 ntTSL 5 BASIC10.02□□□□□ -0.81
SVIPQ8NHG7 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
SVIPQ8NHG7 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
SVIPQ8NHG7 AC020917.4-201ENST00000623994 1999 ntBASIC10.02□□□□□ -0.81
SVIPQ8NHG7 BNIPL-201ENST00000295294 2336 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
SVIPQ8NHG7 SETD4-201ENST00000332131 3015 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
SVIPQ8NHG7 OTOF-204ENST00000402415 5108 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
SVIPQ8NHG7 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC10.02□□□□□ -0.81
SVIPQ8NHG7 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC10.02□□□□□ -0.81
SVIPQ8NHG7 AC027045.3-201ENST00000635215 2884 ntTSL 5 BASIC10.02□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms