Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC21.3■■□□□ 1
COL22A1Q8NFW1 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC21.3■■□□□ 1
COL22A1Q8NFW1 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC21.3■■□□□ 1
COL22A1Q8NFW1 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC21.3■■□□□ 1
COL22A1Q8NFW1 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COL22A1Q8NFW1 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
COL22A1Q8NFW1 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC21.3■■□□□ 1
COL22A1Q8NFW1 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC21.3■■□□□ 1
COL22A1Q8NFW1 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COL22A1Q8NFW1 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
COL22A1Q8NFW1 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COL22A1Q8NFW1 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
COL22A1Q8NFW1 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COL22A1Q8NFW1 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
COL22A1Q8NFW1 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
COL22A1Q8NFW1 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COL22A1Q8NFW1 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
COL22A1Q8NFW1 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
COL22A1Q8NFW1 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC21.29■■□□□ 1
COL22A1Q8NFW1 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC21.29■■□□□ 1
COL22A1Q8NFW1 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
COL22A1Q8NFW1 AC126915.1-201ENST00000522847 1038 ntBASIC21.29■■□□□ 1
COL22A1Q8NFW1 ECM1P1-201ENST00000604092 1279 ntBASIC21.29■■□□□ 1
COL22A1Q8NFW1 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
COL22A1Q8NFW1 AC079336.7-201ENST00000623428 1078 ntBASIC21.29■■□□□ 1
COL22A1Q8NFW1 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC21.29■■□□□ 1
COL22A1Q8NFW1 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
COL22A1Q8NFW1 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC21.29■■□□□ 1
COL22A1Q8NFW1 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
COL22A1Q8NFW1 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC21.29■■□□□ 1
COL22A1Q8NFW1 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC21.29■■□□□ 1
COL22A1Q8NFW1 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC21.29■■□□□ 1
COL22A1Q8NFW1 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC21.29■■□□□ 1
COL22A1Q8NFW1 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC21.29■■□□□ 1
COL22A1Q8NFW1 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
COL22A1Q8NFW1 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
COL22A1Q8NFW1 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC21.29■■□□□ 1
COL22A1Q8NFW1 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
COL22A1Q8NFW1 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC21.29■■□□□ 1
COL22A1Q8NFW1 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC21.29■■□□□ 1
COL22A1Q8NFW1 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
COL22A1Q8NFW1 RNU1-114P-201ENST00000365297 166 ntBASIC21.29■■□□□ 1
COL22A1Q8NFW1 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC21.29■■□□□ 1
COL22A1Q8NFW1 PGGT1BP2-201ENST00000398621 1028 ntBASIC21.29■■□□□ 1
COL22A1Q8NFW1 AC079178.1-201ENST00000420915 656 ntBASIC21.29■■□□□ 1
COL22A1Q8NFW1 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC21.29■■□□□ 1
COL22A1Q8NFW1 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC21.29■■□□□ 1
COL22A1Q8NFW1 MAGEA5-201ENST00000446757 942 ntBASIC21.29■■□□□ 1
COL22A1Q8NFW1 SERPINA13P-202ENST00000478994 924 ntBASIC21.29■■□□□ 1
COL22A1Q8NFW1 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC21.29■■□□□ 1
COL22A1Q8NFW1 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC21.29■■□□□ 1
COL22A1Q8NFW1 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC21.29■■□□□ 1
COL22A1Q8NFW1 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
COL22A1Q8NFW1 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
COL22A1Q8NFW1 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
COL22A1Q8NFW1 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC21.28■■□□□ 1
COL22A1Q8NFW1 AL023775.1-201ENST00000454907 1746 ntBASIC21.28■■□□□ 1
COL22A1Q8NFW1 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
COL22A1Q8NFW1 CYP2AB1P-202ENST00000454440 1456 ntBASIC21.28■■□□□ 1
COL22A1Q8NFW1 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
COL22A1Q8NFW1 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC21.28■■□□□ 1
COL22A1Q8NFW1 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC21.28■■□□□ 1
COL22A1Q8NFW1 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC21.28■■□□□ 1
COL22A1Q8NFW1 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
COL22A1Q8NFW1 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
COL22A1Q8NFW1 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC21.28■■□□□ 1
COL22A1Q8NFW1 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC21.28■■□□□ 1
COL22A1Q8NFW1 AC008267.1-201ENST00000474858 1069 ntBASIC21.28■■□□□ 1
COL22A1Q8NFW1 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC21.28■■□□□ 1
COL22A1Q8NFW1 KRT18P25-201ENST00000508931 1278 ntBASIC21.28■■□□□ 1
COL22A1Q8NFW1 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC21.28■■□□□ 1
COL22A1Q8NFW1 CFL1-214ENST00000534769 758 ntTSL 2 BASIC21.28■■□□□ 1
COL22A1Q8NFW1 KLK11-210ENST00000600362 759 ntTSL 3 BASIC21.28■■□□□ 1
COL22A1Q8NFW1 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC21.28■■□□□ 1
COL22A1Q8NFW1 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
COL22A1Q8NFW1 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC21.27■■□□□ 1
COL22A1Q8NFW1 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
COL22A1Q8NFW1 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
COL22A1Q8NFW1 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC21.27■■□□□ 1
COL22A1Q8NFW1 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
COL22A1Q8NFW1 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
COL22A1Q8NFW1 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC21.27■■□□□ 1
COL22A1Q8NFW1 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
COL22A1Q8NFW1 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
COL22A1Q8NFW1 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
COL22A1Q8NFW1 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
COL22A1Q8NFW1 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC21.27■■□□□ 1
COL22A1Q8NFW1 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC21.27■■□□□ 1
COL22A1Q8NFW1 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC21.27■■□□□ 1
COL22A1Q8NFW1 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
COL22A1Q8NFW1 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC21.27■■□□□ 1
COL22A1Q8NFW1 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
COL22A1Q8NFW1 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
COL22A1Q8NFW1 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC21.27■■□□□ 1
COL22A1Q8NFW1 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC21.27■■□□□ 1
COL22A1Q8NFW1 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC21.27■■□□□ 1
COL22A1Q8NFW1 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
COL22A1Q8NFW1 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
COL22A1Q8NFW1 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
COL22A1Q8NFW1 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC21.27■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms