Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
BEST4Q8NFU0 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
BEST4Q8NFU0 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.2□□□□□ -0.14
BEST4Q8NFU0 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
BEST4Q8NFU0 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
BEST4Q8NFU0 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.2□□□□□ -0.14
BEST4Q8NFU0 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
BEST4Q8NFU0 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC14.2□□□□□ -0.14
BEST4Q8NFU0 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
BEST4Q8NFU0 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.2□□□□□ -0.14
BEST4Q8NFU0 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
BEST4Q8NFU0 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
BEST4Q8NFU0 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.2□□□□□ -0.14
BEST4Q8NFU0 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
BEST4Q8NFU0 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
BEST4Q8NFU0 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
BEST4Q8NFU0 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
BEST4Q8NFU0 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.19□□□□□ -0.14
BEST4Q8NFU0 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.19□□□□□ -0.14
BEST4Q8NFU0 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.19□□□□□ -0.14
BEST4Q8NFU0 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.19□□□□□ -0.14
BEST4Q8NFU0 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.19□□□□□ -0.14
BEST4Q8NFU0 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
BEST4Q8NFU0 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
BEST4Q8NFU0 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
BEST4Q8NFU0 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.19□□□□□ -0.14
BEST4Q8NFU0 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.19□□□□□ -0.14
BEST4Q8NFU0 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
BEST4Q8NFU0 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
BEST4Q8NFU0 KRT8P49-201ENST00000604166 1432 ntBASIC14.19□□□□□ -0.14
BEST4Q8NFU0 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
BEST4Q8NFU0 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
BEST4Q8NFU0 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
BEST4Q8NFU0 AP002414.1-201ENST00000391405 1147 ntBASIC14.19□□□□□ -0.14
BEST4Q8NFU0 AC005521.1-201ENST00000393351 872 ntBASIC14.19□□□□□ -0.14
BEST4Q8NFU0 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC14.19□□□□□ -0.14
BEST4Q8NFU0 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC14.19□□□□□ -0.14
BEST4Q8NFU0 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC14.19□□□□□ -0.14
BEST4Q8NFU0 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
BEST4Q8NFU0 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC14.19□□□□□ -0.14
BEST4Q8NFU0 AC006011.2-201ENST00000621313 1158 ntBASIC14.19□□□□□ -0.14
BEST4Q8NFU0 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.19□□□□□ -0.14
BEST4Q8NFU0 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
BEST4Q8NFU0 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.19□□□□□ -0.14
BEST4Q8NFU0 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
BEST4Q8NFU0 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.19□□□□□ -0.14
BEST4Q8NFU0 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.19□□□□□ -0.14
BEST4Q8NFU0 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
BEST4Q8NFU0 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
BEST4Q8NFU0 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
BEST4Q8NFU0 AC136621.1-201ENST00000624017 2304 ntBASIC14.19□□□□□ -0.14
BEST4Q8NFU0 AC006486.2-201ENST00000624246 2199 ntBASIC14.19□□□□□ -0.14
BEST4Q8NFU0 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
BEST4Q8NFU0 SSR4P1-203ENST00000599569 2260 ntBASIC14.18□□□□□ -0.14
BEST4Q8NFU0 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.18□□□□□ -0.14
BEST4Q8NFU0 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BEST4Q8NFU0 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.18□□□□□ -0.14
BEST4Q8NFU0 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.18□□□□□ -0.14
BEST4Q8NFU0 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
BEST4Q8NFU0 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
BEST4Q8NFU0 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BEST4Q8NFU0 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.18□□□□□ -0.14
BEST4Q8NFU0 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
BEST4Q8NFU0 AC112504.1-201ENST00000623415 1841 ntBASIC14.18□□□□□ -0.14
BEST4Q8NFU0 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
BEST4Q8NFU0 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BEST4Q8NFU0 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
BEST4Q8NFU0 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BEST4Q8NFU0 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
BEST4Q8NFU0 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
BEST4Q8NFU0 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
BEST4Q8NFU0 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
BEST4Q8NFU0 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.18□□□□□ -0.14
BEST4Q8NFU0 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BEST4Q8NFU0 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
BEST4Q8NFU0 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BEST4Q8NFU0 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
BEST4Q8NFU0 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
BEST4Q8NFU0 AL020989.1-201ENST00000422979 469 ntBASIC14.18□□□□□ -0.14
BEST4Q8NFU0 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC14.18□□□□□ -0.14
BEST4Q8NFU0 KRT18P57-201ENST00000443599 1254 ntBASIC14.18□□□□□ -0.14
BEST4Q8NFU0 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
BEST4Q8NFU0 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
BEST4Q8NFU0 AC011498.5-201ENST00000592027 486 ntBASIC14.18□□□□□ -0.14
BEST4Q8NFU0 AC013467.2-201ENST00000605472 835 ntBASIC14.18□□□□□ -0.14
BEST4Q8NFU0 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BEST4Q8NFU0 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
BEST4Q8NFU0 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
BEST4Q8NFU0 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.18□□□□□ -0.14
BEST4Q8NFU0 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BEST4Q8NFU0 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
BEST4Q8NFU0 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BEST4Q8NFU0 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BEST4Q8NFU0 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
BEST4Q8NFU0 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
BEST4Q8NFU0 LINC02447-202ENST00000501888 2146 ntBASIC14.18□□□□□ -0.14
BEST4Q8NFU0 AC006277.1-201ENST00000624348 1610 ntBASIC14.18□□□□□ -0.14
BEST4Q8NFU0 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.18□□□□□ -0.14
BEST4Q8NFU0 CDC14C-201ENST00000428251 1719 ntBASIC14.18□□□□□ -0.14
BEST4Q8NFU0 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms