Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TMEFF1Q8IYR6 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.17■□□□□ 0.18
TMEFF1Q8IYR6 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TMEFF1Q8IYR6 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TMEFF1Q8IYR6 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.17■□□□□ 0.18
TMEFF1Q8IYR6 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
TMEFF1Q8IYR6 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TMEFF1Q8IYR6 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TMEFF1Q8IYR6 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
TMEFF1Q8IYR6 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TMEFF1Q8IYR6 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
TMEFF1Q8IYR6 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMEFF1Q8IYR6 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.16■□□□□ 0.18
TMEFF1Q8IYR6 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TMEFF1Q8IYR6 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TMEFF1Q8IYR6 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TMEFF1Q8IYR6 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TMEFF1Q8IYR6 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.16■□□□□ 0.18
TMEFF1Q8IYR6 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMEFF1Q8IYR6 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.16■□□□□ 0.18
TMEFF1Q8IYR6 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMEFF1Q8IYR6 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TMEFF1Q8IYR6 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TMEFF1Q8IYR6 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.16■□□□□ 0.18
TMEFF1Q8IYR6 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TMEFF1Q8IYR6 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.16■□□□□ 0.18
TMEFF1Q8IYR6 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC16.16■□□□□ 0.18
TMEFF1Q8IYR6 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC16.16■□□□□ 0.18
TMEFF1Q8IYR6 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.16■□□□□ 0.18
TMEFF1Q8IYR6 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.16■□□□□ 0.18
TMEFF1Q8IYR6 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC16.16■□□□□ 0.18
TMEFF1Q8IYR6 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC16.16■□□□□ 0.18
TMEFF1Q8IYR6 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMEFF1Q8IYR6 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC16.16■□□□□ 0.18
TMEFF1Q8IYR6 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC16.16■□□□□ 0.18
TMEFF1Q8IYR6 AC020765.3-201ENST00000613051 740 ntBASIC16.16■□□□□ 0.18
TMEFF1Q8IYR6 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMEFF1Q8IYR6 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.16■□□□□ 0.18
TMEFF1Q8IYR6 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
TMEFF1Q8IYR6 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.16■□□□□ 0.18
TMEFF1Q8IYR6 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMEFF1Q8IYR6 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMEFF1Q8IYR6 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMEFF1Q8IYR6 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TMEFF1Q8IYR6 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.16■□□□□ 0.18
TMEFF1Q8IYR6 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TMEFF1Q8IYR6 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMEFF1Q8IYR6 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.16■□□□□ 0.18
TMEFF1Q8IYR6 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMEFF1Q8IYR6 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TMEFF1Q8IYR6 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMEFF1Q8IYR6 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMEFF1Q8IYR6 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.16■□□□□ 0.18
TMEFF1Q8IYR6 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TMEFF1Q8IYR6 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TMEFF1Q8IYR6 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.15■□□□□ 0.18
TMEFF1Q8IYR6 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMEFF1Q8IYR6 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMEFF1Q8IYR6 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMEFF1Q8IYR6 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TMEFF1Q8IYR6 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TMEFF1Q8IYR6 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.15■□□□□ 0.18
TMEFF1Q8IYR6 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
TMEFF1Q8IYR6 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMEFF1Q8IYR6 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMEFF1Q8IYR6 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMEFF1Q8IYR6 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMEFF1Q8IYR6 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMEFF1Q8IYR6 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC16.15■□□□□ 0.18
TMEFF1Q8IYR6 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.15■□□□□ 0.18
TMEFF1Q8IYR6 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.15■□□□□ 0.18
TMEFF1Q8IYR6 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.15■□□□□ 0.18
TMEFF1Q8IYR6 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC16.15■□□□□ 0.18
TMEFF1Q8IYR6 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMEFF1Q8IYR6 FUZ-207ENST00000526575 482 ntTSL 4 BASIC16.15■□□□□ 0.18
TMEFF1Q8IYR6 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMEFF1Q8IYR6 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TMEFF1Q8IYR6 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.15■□□□□ 0.18
TMEFF1Q8IYR6 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC16.15■□□□□ 0.18
TMEFF1Q8IYR6 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC16.15■□□□□ 0.18
TMEFF1Q8IYR6 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.15■□□□□ 0.18
TMEFF1Q8IYR6 MIR4259-201ENST00000584466 101 ntBASIC16.15■□□□□ 0.18
TMEFF1Q8IYR6 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TMEFF1Q8IYR6 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.15■□□□□ 0.18
TMEFF1Q8IYR6 AC093726.1-201ENST00000608064 963 ntBASIC16.15■□□□□ 0.18
TMEFF1Q8IYR6 AC099568.2-201ENST00000609194 695 ntBASIC16.15■□□□□ 0.18
TMEFF1Q8IYR6 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TMEFF1Q8IYR6 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.15■□□□□ 0.18
TMEFF1Q8IYR6 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TMEFF1Q8IYR6 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMEFF1Q8IYR6 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMEFF1Q8IYR6 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.15■□□□□ 0.18
TMEFF1Q8IYR6 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMEFF1Q8IYR6 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMEFF1Q8IYR6 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.15■□□□□ 0.18
TMEFF1Q8IYR6 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
TMEFF1Q8IYR6 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.14■□□□□ 0.18
TMEFF1Q8IYR6 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TMEFF1Q8IYR6 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
TMEFF1Q8IYR6 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms